Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Casc4Q6P2L7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Casc4Q6P2L7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Casc4Q6P2L7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Casc4Q6P2L7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Casc4Q6P2L7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Casc4Q6P2L7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Casc4Q6P2L7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Casc4Q6P2L7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Casc4Q6P2L7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Casc4Q6P2L7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Casc4Q6P2L7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Casc4Q6P2L7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Casc4Q6P2L7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.83■□□□□ 0.76
Casc4Q6P2L7 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.83■□□□□ 0.76
Casc4Q6P2L7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Casc4Q6P2L7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Casc4Q6P2L7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Casc4Q6P2L7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Casc4Q6P2L7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Casc4Q6P2L7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Casc4Q6P2L7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Casc4Q6P2L7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Casc4Q6P2L7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Casc4Q6P2L7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Gm12251-201ENSMUST00000117893 792 ntBASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.81■□□□□ 0.76
Casc4Q6P2L7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.8■□□□□ 0.76
Casc4Q6P2L7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Casc4Q6P2L7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Casc4Q6P2L7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Casc4Q6P2L7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Casc4Q6P2L7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Casc4Q6P2L7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Casc4Q6P2L7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Casc4Q6P2L7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Casc4Q6P2L7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Casc4Q6P2L7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Casc4Q6P2L7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Casc4Q6P2L7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.78■□□□□ 0.76
Casc4Q6P2L7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.78■□□□□ 0.76
Casc4Q6P2L7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Casc4Q6P2L7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Casc4Q6P2L7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Casc4Q6P2L7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Casc4Q6P2L7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Casc4Q6P2L7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Casc4Q6P2L7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Casc4Q6P2L7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.78■□□□□ 0.76
Casc4Q6P2L7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Casc4Q6P2L7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc4Q6P2L7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc4Q6P2L7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Casc4Q6P2L7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc4Q6P2L7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Casc4Q6P2L7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.77■□□□□ 0.76
Casc4Q6P2L7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc4Q6P2L7 Gm8493-201ENSMUST00000196881 489 ntBASIC19.77■□□□□ 0.76
Casc4Q6P2L7 Spcs1-204ENSMUST00000226782 949 ntBASIC19.77■□□□□ 0.76
Casc4Q6P2L7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc4Q6P2L7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc4Q6P2L7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Casc4Q6P2L7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc4Q6P2L7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc4Q6P2L7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.76■□□□□ 0.75
Casc4Q6P2L7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Casc4Q6P2L7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Casc4Q6P2L7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc4Q6P2L7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Casc4Q6P2L7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Casc4Q6P2L7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc4Q6P2L7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Casc4Q6P2L7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Casc4Q6P2L7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms