Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.22□□□□□ -0.13
Ndufa4Q62425 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufa4Q62425 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Ndufa4Q62425 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ndufa4Q62425 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
Ndufa4Q62425 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ndufa4Q62425 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ndufa4Q62425 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.2□□□□□ -0.14
Ndufa4Q62425 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndufa4Q62425 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.18□□□□□ -0.14
Ndufa4Q62425 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndufa4Q62425 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.17□□□□□ -0.14
Ndufa4Q62425 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ndufa4Q62425 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.16□□□□□ -0.14
Ndufa4Q62425 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndufa4Q62425 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndufa4Q62425 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndufa4Q62425 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndufa4Q62425 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ndufa4Q62425 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ndufa4Q62425 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndufa4Q62425 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms