Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.88■□□□□ 0.61
AtmQ62388 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.88■□□□□ 0.61
AtmQ62388 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AtmQ62388 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AtmQ62388 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AtmQ62388 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AtmQ62388 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AtmQ62388 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AtmQ62388 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AtmQ62388 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AtmQ62388 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
AtmQ62388 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AtmQ62388 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.87■□□□□ 0.61
AtmQ62388 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.87■□□□□ 0.61
AtmQ62388 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AtmQ62388 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.87■□□□□ 0.61
AtmQ62388 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AtmQ62388 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AtmQ62388 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.87■□□□□ 0.61
AtmQ62388 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
AtmQ62388 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.86■□□□□ 0.61
AtmQ62388 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AtmQ62388 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.86■□□□□ 0.61
AtmQ62388 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AtmQ62388 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AtmQ62388 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.86■□□□□ 0.61
AtmQ62388 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.86■□□□□ 0.61
AtmQ62388 Gm26524-201ENSMUST00000192339 390 ntBASIC18.86■□□□□ 0.61
AtmQ62388 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.86■□□□□ 0.61
AtmQ62388 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AtmQ62388 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AtmQ62388 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AtmQ62388 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AtmQ62388 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AtmQ62388 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AtmQ62388 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AtmQ62388 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AtmQ62388 Gm7290-201ENSMUST00000104990 617 ntBASIC18.85■□□□□ 0.61
AtmQ62388 Gm12918-201ENSMUST00000120234 636 ntBASIC18.85■□□□□ 0.61
AtmQ62388 Gm15710-201ENSMUST00000121821 636 ntBASIC18.85■□□□□ 0.61
AtmQ62388 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
AtmQ62388 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AtmQ62388 Gm5075-201ENSMUST00000196916 622 ntBASIC18.85■□□□□ 0.61
AtmQ62388 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.85■□□□□ 0.61
AtmQ62388 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.85■□□□□ 0.61
AtmQ62388 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AtmQ62388 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AtmQ62388 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AtmQ62388 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.84■□□□□ 0.61
AtmQ62388 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AtmQ62388 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AtmQ62388 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AtmQ62388 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AtmQ62388 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
AtmQ62388 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AtmQ62388 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AtmQ62388 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.83■□□□□ 0.6
AtmQ62388 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AtmQ62388 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AtmQ62388 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.83■□□□□ 0.6
AtmQ62388 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
AtmQ62388 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AtmQ62388 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AtmQ62388 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AtmQ62388 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.83■□□□□ 0.6
AtmQ62388 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.82■□□□□ 0.6
AtmQ62388 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.82■□□□□ 0.6
AtmQ62388 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AtmQ62388 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AtmQ62388 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
AtmQ62388 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.82■□□□□ 0.6
AtmQ62388 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AtmQ62388 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AtmQ62388 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.81■□□□□ 0.6
AtmQ62388 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
AtmQ62388 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
AtmQ62388 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AtmQ62388 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AtmQ62388 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AtmQ62388 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AtmQ62388 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.8■□□□□ 0.6
AtmQ62388 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
AtmQ62388 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AtmQ62388 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AtmQ62388 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
AtmQ62388 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AtmQ62388 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.8■□□□□ 0.6
AtmQ62388 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
AtmQ62388 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AtmQ62388 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.8■□□□□ 0.6
AtmQ62388 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AtmQ62388 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AtmQ62388 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AtmQ62388 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AtmQ62388 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AtmQ62388 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AtmQ62388 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.79■□□□□ 0.6
AtmQ62388 Gm6420-201ENSMUST00000193885 723 ntBASIC18.79■□□□□ 0.6
AtmQ62388 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
AtmQ62388 Gm27275-201ENSMUST00000184318 272 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms