Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Itm2aQ61500 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Itm2aQ61500 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Itm2aQ61500 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Itm2aQ61500 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Itm2aQ61500 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.31■□□□□ 0.68
Itm2aQ61500 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Itm2aQ61500 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Itm2aQ61500 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Itm2aQ61500 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Itm2aQ61500 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Itm2aQ61500 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Itm2aQ61500 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Itm2aQ61500 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Itm2aQ61500 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Itm2aQ61500 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Itm2aQ61500 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Itm2aQ61500 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Itm2aQ61500 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Itm2aQ61500 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Itm2aQ61500 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Itm2aQ61500 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Itm2aQ61500 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Itm2aQ61500 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Itm2aQ61500 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Itm2aQ61500 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Itm2aQ61500 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.29■□□□□ 0.68
Itm2aQ61500 Gm5921-201ENSMUST00000075898 882 ntBASIC19.29■□□□□ 0.68
Itm2aQ61500 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Itm2aQ61500 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Itm2aQ61500 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Itm2aQ61500 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Itm2aQ61500 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Itm2aQ61500 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Itm2aQ61500 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Itm2aQ61500 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Itm2aQ61500 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Itm2aQ61500 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Itm2aQ61500 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Itm2aQ61500 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Itm2aQ61500 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Itm2aQ61500 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Itm2aQ61500 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Itm2aQ61500 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Itm2aQ61500 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Itm2aQ61500 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Itm2aQ61500 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Itm2aQ61500 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Itm2aQ61500 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.27■□□□□ 0.68
Itm2aQ61500 Gm10232-201ENSMUST00000089221 720 ntBASIC19.27■□□□□ 0.68
Itm2aQ61500 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Itm2aQ61500 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Itm2aQ61500 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itm2aQ61500 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itm2aQ61500 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itm2aQ61500 Mir6236-201ENSMUST00000184437 123 ntBASIC19.26■□□□□ 0.67
Itm2aQ61500 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Itm2aQ61500 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Itm2aQ61500 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itm2aQ61500 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itm2aQ61500 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Itm2aQ61500 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.25■□□□□ 0.67
Itm2aQ61500 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itm2aQ61500 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itm2aQ61500 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itm2aQ61500 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Itm2aQ61500 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.25■□□□□ 0.67
Itm2aQ61500 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itm2aQ61500 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itm2aQ61500 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itm2aQ61500 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Itm2aQ61500 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.24■□□□□ 0.67
Itm2aQ61500 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itm2aQ61500 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itm2aQ61500 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Itm2aQ61500 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.24■□□□□ 0.67
Itm2aQ61500 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itm2aQ61500 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itm2aQ61500 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itm2aQ61500 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Itm2aQ61500 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itm2aQ61500 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itm2aQ61500 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Itm2aQ61500 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.23■□□□□ 0.67
Itm2aQ61500 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Itm2aQ61500 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.23■□□□□ 0.67
Itm2aQ61500 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itm2aQ61500 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itm2aQ61500 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itm2aQ61500 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itm2aQ61500 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itm2aQ61500 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itm2aQ61500 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itm2aQ61500 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Itm2aQ61500 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itm2aQ61500 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itm2aQ61500 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itm2aQ61500 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itm2aQ61500 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Itm2aQ61500 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms