Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.91■□□□□ 0.78
Six4Q61321 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six4Q61321 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Six4Q61321 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six4Q61321 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Six4Q61321 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six4Q61321 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six4Q61321 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.9■□□□□ 0.78
Six4Q61321 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
Six4Q61321 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six4Q61321 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six4Q61321 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Six4Q61321 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Six4Q61321 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Six4Q61321 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.9■□□□□ 0.78
Six4Q61321 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six4Q61321 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Six4Q61321 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Six4Q61321 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six4Q61321 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.89■□□□□ 0.77
Six4Q61321 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Six4Q61321 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six4Q61321 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six4Q61321 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six4Q61321 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six4Q61321 AA386476-201ENSMUST00000098781 1665 ntBASIC19.89■□□□□ 0.77
Six4Q61321 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six4Q61321 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six4Q61321 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Six4Q61321 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Six4Q61321 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Six4Q61321 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six4Q61321 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six4Q61321 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six4Q61321 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Six4Q61321 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six4Q61321 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Six4Q61321 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.87■□□□□ 0.77
Six4Q61321 Smad6-203ENSMUST00000179458 273 ntBASIC19.87■□□□□ 0.77
Six4Q61321 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Six4Q61321 Serp2-204ENSMUST00000228055 705 ntBASIC19.87■□□□□ 0.77
Six4Q61321 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six4Q61321 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six4Q61321 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six4Q61321 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six4Q61321 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.87■□□□□ 0.77
Six4Q61321 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six4Q61321 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six4Q61321 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six4Q61321 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Six4Q61321 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Six4Q61321 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.86■□□□□ 0.77
Six4Q61321 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.86■□□□□ 0.77
Six4Q61321 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Six4Q61321 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six4Q61321 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Six4Q61321 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six4Q61321 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.86■□□□□ 0.77
Six4Q61321 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six4Q61321 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six4Q61321 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Six4Q61321 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six4Q61321 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Six4Q61321 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Six4Q61321 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six4Q61321 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Six4Q61321 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Six4Q61321 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Six4Q61321 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six4Q61321 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six4Q61321 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six4Q61321 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.84■□□□□ 0.77
Six4Q61321 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six4Q61321 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six4Q61321 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Six4Q61321 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Six4Q61321 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.83■□□□□ 0.77
Six4Q61321 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Six4Q61321 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Six4Q61321 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Six4Q61321 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Six4Q61321 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.83■□□□□ 0.77
Six4Q61321 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Six4Q61321 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.83■□□□□ 0.76
Six4Q61321 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Six4Q61321 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Six4Q61321 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six4Q61321 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six4Q61321 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six4Q61321 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Six4Q61321 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.82■□□□□ 0.76
Six4Q61321 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Six4Q61321 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six4Q61321 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six4Q61321 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Six4Q61321 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six4Q61321 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six4Q61321 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six4Q61321 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Six4Q61321 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms