Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FntaQ61239 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FntaQ61239 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.76■□□□□ 0.91
FntaQ61239 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FntaQ61239 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FntaQ61239 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.76■□□□□ 0.91
FntaQ61239 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FntaQ61239 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FntaQ61239 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FntaQ61239 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FntaQ61239 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FntaQ61239 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FntaQ61239 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FntaQ61239 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FntaQ61239 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.75■□□□□ 0.91
FntaQ61239 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
FntaQ61239 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FntaQ61239 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.75■□□□□ 0.91
FntaQ61239 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FntaQ61239 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
FntaQ61239 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.74■□□□□ 0.91
FntaQ61239 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FntaQ61239 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FntaQ61239 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
FntaQ61239 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.74■□□□□ 0.91
FntaQ61239 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FntaQ61239 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FntaQ61239 Gm10232-201ENSMUST00000089221 720 ntBASIC20.74■□□□□ 0.91
FntaQ61239 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.74■□□□□ 0.91
FntaQ61239 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FntaQ61239 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FntaQ61239 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FntaQ61239 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
FntaQ61239 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FntaQ61239 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.73■□□□□ 0.91
FntaQ61239 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FntaQ61239 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
FntaQ61239 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
FntaQ61239 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FntaQ61239 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FntaQ61239 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FntaQ61239 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FntaQ61239 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
FntaQ61239 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FntaQ61239 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FntaQ61239 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FntaQ61239 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FntaQ61239 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FntaQ61239 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FntaQ61239 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FntaQ61239 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FntaQ61239 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
FntaQ61239 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.71■□□□□ 0.91
FntaQ61239 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
FntaQ61239 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FntaQ61239 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FntaQ61239 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FntaQ61239 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FntaQ61239 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
FntaQ61239 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FntaQ61239 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FntaQ61239 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FntaQ61239 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FntaQ61239 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FntaQ61239 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FntaQ61239 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FntaQ61239 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FntaQ61239 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FntaQ61239 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FntaQ61239 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.68■□□□□ 0.9
FntaQ61239 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
FntaQ61239 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FntaQ61239 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FntaQ61239 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FntaQ61239 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FntaQ61239 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FntaQ61239 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FntaQ61239 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FntaQ61239 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FntaQ61239 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FntaQ61239 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FntaQ61239 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FntaQ61239 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
FntaQ61239 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FntaQ61239 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FntaQ61239 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FntaQ61239 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FntaQ61239 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FntaQ61239 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FntaQ61239 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FntaQ61239 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
FntaQ61239 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FntaQ61239 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FntaQ61239 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.65■□□□□ 0.9
FntaQ61239 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FntaQ61239 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FntaQ61239 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.65■□□□□ 0.9
FntaQ61239 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FntaQ61239 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FntaQ61239 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms