Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hif1aQ61221 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hif1aQ61221 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.77■□□□□ 0.76
Hif1aQ61221 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hif1aQ61221 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.77■□□□□ 0.76
Hif1aQ61221 Gm5812-201ENSMUST00000061073 957 ntBASIC19.77■□□□□ 0.76
Hif1aQ61221 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hif1aQ61221 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hif1aQ61221 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hif1aQ61221 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hif1aQ61221 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hif1aQ61221 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hif1aQ61221 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hif1aQ61221 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hif1aQ61221 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.76■□□□□ 0.75
Hif1aQ61221 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hif1aQ61221 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hif1aQ61221 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hif1aQ61221 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hif1aQ61221 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hif1aQ61221 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hif1aQ61221 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hif1aQ61221 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hif1aQ61221 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Hif1aQ61221 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hif1aQ61221 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hif1aQ61221 Gm40881-201ENSMUST00000223397 166 ntBASIC19.75■□□□□ 0.75
Hif1aQ61221 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hif1aQ61221 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hif1aQ61221 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Hif1aQ61221 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hif1aQ61221 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hif1aQ61221 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.74■□□□□ 0.75
Hif1aQ61221 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hif1aQ61221 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.74■□□□□ 0.75
Hif1aQ61221 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.74■□□□□ 0.75
Hif1aQ61221 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hif1aQ61221 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hif1aQ61221 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hif1aQ61221 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hif1aQ61221 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Hif1aQ61221 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Hif1aQ61221 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Hif1aQ61221 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Hif1aQ61221 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hif1aQ61221 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Hif1aQ61221 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hif1aQ61221 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hif1aQ61221 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.73■□□□□ 0.75
Hif1aQ61221 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hif1aQ61221 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.73■□□□□ 0.75
Hif1aQ61221 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.73■□□□□ 0.75
Hif1aQ61221 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hif1aQ61221 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hif1aQ61221 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Hif1aQ61221 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Hif1aQ61221 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hif1aQ61221 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hif1aQ61221 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hif1aQ61221 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.72■□□□□ 0.75
Hif1aQ61221 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hif1aQ61221 Gm43530-201ENSMUST00000195920 274 ntBASIC19.72■□□□□ 0.75
Hif1aQ61221 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hif1aQ61221 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hif1aQ61221 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hif1aQ61221 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hif1aQ61221 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Hif1aQ61221 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hif1aQ61221 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hif1aQ61221 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hif1aQ61221 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hif1aQ61221 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hif1aQ61221 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hif1aQ61221 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hif1aQ61221 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hif1aQ61221 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.7■□□□□ 0.74
Hif1aQ61221 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hif1aQ61221 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hif1aQ61221 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.7■□□□□ 0.74
Hif1aQ61221 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.7■□□□□ 0.74
Hif1aQ61221 Gm15820-201ENSMUST00000201566 728 ntBASIC19.7■□□□□ 0.74
Hif1aQ61221 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hif1aQ61221 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hif1aQ61221 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hif1aQ61221 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Hif1aQ61221 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hif1aQ61221 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hif1aQ61221 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hif1aQ61221 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hif1aQ61221 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hif1aQ61221 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.69■□□□□ 0.74
Hif1aQ61221 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hif1aQ61221 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hif1aQ61221 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hif1aQ61221 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hif1aQ61221 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hif1aQ61221 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hif1aQ61221 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hif1aQ61221 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hif1aQ61221 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms