Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Scnn1aQ61180 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Scnn1aQ61180 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Scnn1aQ61180 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.77■■□□□ 1.24
Scnn1aQ61180 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.77■■□□□ 1.24
Scnn1aQ61180 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Scnn1aQ61180 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.23
Scnn1aQ61180 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.76■■□□□ 1.23
Scnn1aQ61180 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Scnn1aQ61180 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Scnn1aQ61180 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.76■■□□□ 1.23
Scnn1aQ61180 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Scnn1aQ61180 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Scnn1aQ61180 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Scnn1aQ61180 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Scnn1aQ61180 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Scnn1aQ61180 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.75■■□□□ 1.23
Scnn1aQ61180 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.75■■□□□ 1.23
Scnn1aQ61180 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Scnn1aQ61180 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Scnn1aQ61180 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Scnn1aQ61180 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scnn1aQ61180 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.74■■□□□ 1.23
Scnn1aQ61180 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scnn1aQ61180 Gm29257-201ENSMUST00000186115 639 ntBASIC22.74■■□□□ 1.23
Scnn1aQ61180 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.74■■□□□ 1.23
Scnn1aQ61180 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.74■■□□□ 1.23
Scnn1aQ61180 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scnn1aQ61180 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scnn1aQ61180 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Scnn1aQ61180 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scnn1aQ61180 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scnn1aQ61180 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.73■■□□□ 1.23
Scnn1aQ61180 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.73■■□□□ 1.23
Scnn1aQ61180 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.73■■□□□ 1.23
Scnn1aQ61180 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Scnn1aQ61180 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.72■■□□□ 1.23
Scnn1aQ61180 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Scnn1aQ61180 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Scnn1aQ61180 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Scnn1aQ61180 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.72■■□□□ 1.23
Scnn1aQ61180 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.71■■□□□ 1.23
Scnn1aQ61180 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Scnn1aQ61180 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Scnn1aQ61180 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
Scnn1aQ61180 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scnn1aQ61180 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scnn1aQ61180 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.7■■□□□ 1.23
Scnn1aQ61180 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Scnn1aQ61180 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scnn1aQ61180 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scnn1aQ61180 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Scnn1aQ61180 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scnn1aQ61180 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.69■■□□□ 1.22
Scnn1aQ61180 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scnn1aQ61180 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scnn1aQ61180 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scnn1aQ61180 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scnn1aQ61180 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scnn1aQ61180 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Scnn1aQ61180 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scnn1aQ61180 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Scnn1aQ61180 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.68■■□□□ 1.22
Scnn1aQ61180 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scnn1aQ61180 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Scnn1aQ61180 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scnn1aQ61180 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scnn1aQ61180 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scnn1aQ61180 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scnn1aQ61180 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scnn1aQ61180 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Scnn1aQ61180 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.67■■□□□ 1.22
Scnn1aQ61180 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Scnn1aQ61180 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scnn1aQ61180 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.66■■□□□ 1.22
Scnn1aQ61180 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scnn1aQ61180 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Scnn1aQ61180 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Scnn1aQ61180 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scnn1aQ61180 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scnn1aQ61180 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scnn1aQ61180 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Scnn1aQ61180 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Scnn1aQ61180 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scnn1aQ61180 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scnn1aQ61180 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.65■■□□□ 1.22
Scnn1aQ61180 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scnn1aQ61180 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scnn1aQ61180 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Scnn1aQ61180 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.65■■□□□ 1.22
Scnn1aQ61180 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scnn1aQ61180 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scnn1aQ61180 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.64■■□□□ 1.22
Scnn1aQ61180 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scnn1aQ61180 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scnn1aQ61180 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.64■■□□□ 1.21
Scnn1aQ61180 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Scnn1aQ61180 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.64■■□□□ 1.21
Scnn1aQ61180 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.64■■□□□ 1.21
Scnn1aQ61180 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms