Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClpbQ60649 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.81■□□□□ 0.6
ClpbQ60649 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClpbQ60649 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ClpbQ60649 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ClpbQ60649 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ClpbQ60649 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClpbQ60649 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ClpbQ60649 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ClpbQ60649 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ClpbQ60649 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.81■□□□□ 0.6
ClpbQ60649 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClpbQ60649 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ClpbQ60649 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ClpbQ60649 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClpbQ60649 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClpbQ60649 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClpbQ60649 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.79■□□□□ 0.6
ClpbQ60649 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.79■□□□□ 0.6
ClpbQ60649 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClpbQ60649 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClpbQ60649 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ClpbQ60649 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ClpbQ60649 Mir7075-201ENSMUST00000184187 82 ntBASIC18.79■□□□□ 0.6
ClpbQ60649 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.79■□□□□ 0.6
ClpbQ60649 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ClpbQ60649 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
ClpbQ60649 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClpbQ60649 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ClpbQ60649 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.79■□□□□ 0.6
ClpbQ60649 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClpbQ60649 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClpbQ60649 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClpbQ60649 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.78■□□□□ 0.6
ClpbQ60649 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClpbQ60649 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ClpbQ60649 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.78■□□□□ 0.6
ClpbQ60649 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ClpbQ60649 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ClpbQ60649 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClpbQ60649 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClpbQ60649 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ClpbQ60649 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ClpbQ60649 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ClpbQ60649 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClpbQ60649 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClpbQ60649 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClpbQ60649 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.77■□□□□ 0.6
ClpbQ60649 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ClpbQ60649 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClpbQ60649 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
ClpbQ60649 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClpbQ60649 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.76■□□□□ 0.59
ClpbQ60649 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
ClpbQ60649 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.76■□□□□ 0.59
ClpbQ60649 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
ClpbQ60649 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClpbQ60649 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
ClpbQ60649 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClpbQ60649 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClpbQ60649 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClpbQ60649 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClpbQ60649 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ClpbQ60649 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClpbQ60649 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClpbQ60649 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ClpbQ60649 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.75■□□□□ 0.59
ClpbQ60649 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.75■□□□□ 0.59
ClpbQ60649 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ClpbQ60649 Gm6139-201ENSMUST00000079261 882 ntBASIC18.75■□□□□ 0.59
ClpbQ60649 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ClpbQ60649 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ClpbQ60649 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.74■□□□□ 0.59
ClpbQ60649 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClpbQ60649 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClpbQ60649 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ClpbQ60649 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClpbQ60649 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClpbQ60649 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.74■□□□□ 0.59
ClpbQ60649 Serp2-204ENSMUST00000228055 705 ntBASIC18.74■□□□□ 0.59
ClpbQ60649 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClpbQ60649 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClpbQ60649 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ClpbQ60649 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClpbQ60649 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClpbQ60649 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClpbQ60649 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.73■□□□□ 0.59
ClpbQ60649 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ClpbQ60649 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.73■□□□□ 0.59
ClpbQ60649 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.73■□□□□ 0.59
ClpbQ60649 Gm8493-201ENSMUST00000196881 489 ntBASIC18.73■□□□□ 0.59
ClpbQ60649 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClpbQ60649 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClpbQ60649 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.73■□□□□ 0.59
ClpbQ60649 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClpbQ60649 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ClpbQ60649 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClpbQ60649 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ClpbQ60649 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
ClpbQ60649 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms