Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h4Q60641 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h4Q60641 Mir6236-201ENSMUST00000184437 123 ntBASIC18.68■□□□□ 0.58
Nr1h4Q60641 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nr1h4Q60641 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h4Q60641 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h4Q60641 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.68■□□□□ 0.58
Nr1h4Q60641 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nr1h4Q60641 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.67■□□□□ 0.58
Nr1h4Q60641 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h4Q60641 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Nr1h4Q60641 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h4Q60641 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h4Q60641 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nr1h4Q60641 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h4Q60641 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nr1h4Q60641 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h4Q60641 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h4Q60641 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Gm40881-201ENSMUST00000223397 166 ntBASIC18.66■□□□□ 0.58
Nr1h4Q60641 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h4Q60641 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nr1h4Q60641 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nr1h4Q60641 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nr1h4Q60641 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nr1h4Q60641 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Nr1h4Q60641 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h4Q60641 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.64■□□□□ 0.57
Nr1h4Q60641 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h4Q60641 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nr1h4Q60641 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h4Q60641 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h4Q60641 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h4Q60641 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.64■□□□□ 0.57
Nr1h4Q60641 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Nr1h4Q60641 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h4Q60641 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.64■□□□□ 0.57
Nr1h4Q60641 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nr1h4Q60641 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Nr1h4Q60641 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h4Q60641 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nr1h4Q60641 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h4Q60641 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h4Q60641 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h4Q60641 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h4Q60641 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h4Q60641 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h4Q60641 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nr1h4Q60641 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nr1h4Q60641 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h4Q60641 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h4Q60641 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h4Q60641 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h4Q60641 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h4Q60641 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h4Q60641 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.61■□□□□ 0.57
Nr1h4Q60641 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nr1h4Q60641 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.61■□□□□ 0.57
Nr1h4Q60641 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.61■□□□□ 0.57
Nr1h4Q60641 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h4Q60641 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms