Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Smad6-203ENSMUST00000179458 273 ntBASIC18.78■□□□□ 0.6
Xrcc1Q60596 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Xrcc1Q60596 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrcc1Q60596 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrcc1Q60596 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.78■□□□□ 0.6
Xrcc1Q60596 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.78■□□□□ 0.6
Xrcc1Q60596 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrcc1Q60596 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xrcc1Q60596 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Xrcc1Q60596 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Xrcc1Q60596 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.77■□□□□ 0.6
Xrcc1Q60596 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.77■□□□□ 0.6
Xrcc1Q60596 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xrcc1Q60596 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xrcc1Q60596 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Xrcc1Q60596 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Xrcc1Q60596 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Xrcc1Q60596 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.76■□□□□ 0.59
Xrcc1Q60596 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrcc1Q60596 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.75■□□□□ 0.59
Xrcc1Q60596 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrcc1Q60596 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Xrcc1Q60596 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrcc1Q60596 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrcc1Q60596 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.74■□□□□ 0.59
Xrcc1Q60596 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Xrcc1Q60596 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrcc1Q60596 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrcc1Q60596 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.74■□□□□ 0.59
Xrcc1Q60596 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrcc1Q60596 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.74■□□□□ 0.59
Xrcc1Q60596 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrcc1Q60596 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Xrcc1Q60596 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Xrcc1Q60596 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Xrcc1Q60596 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Xrcc1Q60596 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Xrcc1Q60596 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Xrcc1Q60596 Gm26833-201ENSMUST00000180899 440 ntBASIC18.73■□□□□ 0.59
Xrcc1Q60596 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Xrcc1Q60596 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Xrcc1Q60596 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Xrcc1Q60596 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Xrcc1Q60596 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Xrcc1Q60596 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.72■□□□□ 0.59
Xrcc1Q60596 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Xrcc1Q60596 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.72■□□□□ 0.59
Xrcc1Q60596 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Xrcc1Q60596 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Xrcc1Q60596 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Xrcc1Q60596 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Xrcc1Q60596 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Xrcc1Q60596 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Xrcc1Q60596 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Xrcc1Q60596 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Xrcc1Q60596 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Xrcc1Q60596 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Xrcc1Q60596 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Xrcc1Q60596 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Xrcc1Q60596 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Xrcc1Q60596 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Xrcc1Q60596 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Xrcc1Q60596 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Xrcc1Q60596 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Xrcc1Q60596 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.7■□□□□ 0.58
Xrcc1Q60596 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Xrcc1Q60596 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Xrcc1Q60596 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Xrcc1Q60596 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Xrcc1Q60596 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Xrcc1Q60596 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Xrcc1Q60596 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Xrcc1Q60596 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Xrcc1Q60596 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms