Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8d-1Q5R1H8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8d-1Q5R1H8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8d-1Q5R1H8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8d-1Q5R1H8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Trav8d-1Q5R1H8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16■□□□□ 0.15
Trav8d-1Q5R1H8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16■□□□□ 0.15
Trav8d-1Q5R1H8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8d-1Q5R1H8 AC116713.1-201ENSMUST00000215074 430 ntBASIC16■□□□□ 0.15
Trav8d-1Q5R1H8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8d-1Q5R1H8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8d-1Q5R1H8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8d-1Q5R1H8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav8d-1Q5R1H8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8d-1Q5R1H8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8d-1Q5R1H8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8d-1Q5R1H8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8d-1Q5R1H8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav8d-1Q5R1H8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8d-1Q5R1H8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8d-1Q5R1H8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8d-1Q5R1H8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8d-1Q5R1H8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Gm10399-202ENSMUST00000202768 748 ntBASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Rps24-207ENSMUST00000224568 714 ntBASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8d-1Q5R1H8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8d-1Q5R1H8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-1Q5R1H8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-1Q5R1H8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-1Q5R1H8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-1Q5R1H8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav8d-1Q5R1H8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-1Q5R1H8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Trav8d-1Q5R1H8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-1Q5R1H8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8d-1Q5R1H8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Trav8d-1Q5R1H8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8d-1Q5R1H8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav8d-1Q5R1H8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav8d-1Q5R1H8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Trav8d-1Q5R1H8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8d-1Q5R1H8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8d-1Q5R1H8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms