Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Gm10399-202ENSMUST00000202768 748 ntBASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clhc1Q5M6W3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clhc1Q5M6W3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clhc1Q5M6W3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clhc1Q5M6W3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clhc1Q5M6W3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Clhc1Q5M6W3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clhc1Q5M6W3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.82■□□□□ 0.6
Clhc1Q5M6W3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clhc1Q5M6W3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clhc1Q5M6W3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clhc1Q5M6W3 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.82■□□□□ 0.6
Clhc1Q5M6W3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clhc1Q5M6W3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clhc1Q5M6W3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clhc1Q5M6W3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.82■□□□□ 0.6
Clhc1Q5M6W3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.82■□□□□ 0.6
Clhc1Q5M6W3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Rarb-207ENSMUST00000225921 2756 ntBASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clhc1Q5M6W3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Clhc1Q5M6W3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms