Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn2bQ56A07 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn2bQ56A07 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.41■□□□□ 0.7
Scn2bQ56A07 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn2bQ56A07 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Scn2bQ56A07 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn2bQ56A07 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn2bQ56A07 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn2bQ56A07 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn2bQ56A07 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn2bQ56A07 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Scn2bQ56A07 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn2bQ56A07 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn2bQ56A07 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn2bQ56A07 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn2bQ56A07 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn2bQ56A07 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn2bQ56A07 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Scn2bQ56A07 Gm9870-201ENSMUST00000063874 645 ntBASIC19.4■□□□□ 0.7
Scn2bQ56A07 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.4■□□□□ 0.7
Scn2bQ56A07 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn2bQ56A07 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn2bQ56A07 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
Scn2bQ56A07 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn2bQ56A07 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.39■□□□□ 0.69
Scn2bQ56A07 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn2bQ56A07 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Scn2bQ56A07 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Scn2bQ56A07 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.39■□□□□ 0.69
Scn2bQ56A07 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Scn2bQ56A07 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.39■□□□□ 0.69
Scn2bQ56A07 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn2bQ56A07 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn2bQ56A07 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn2bQ56A07 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn2bQ56A07 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.38■□□□□ 0.69
Scn2bQ56A07 Gm43530-201ENSMUST00000195920 274 ntBASIC19.38■□□□□ 0.69
Scn2bQ56A07 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn2bQ56A07 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn2bQ56A07 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn2bQ56A07 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn2bQ56A07 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn2bQ56A07 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn2bQ56A07 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn2bQ56A07 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn2bQ56A07 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn2bQ56A07 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn2bQ56A07 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn2bQ56A07 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Mir6236-201ENSMUST00000184437 123 ntBASIC19.36■□□□□ 0.69
Scn2bQ56A07 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn2bQ56A07 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Scn2bQ56A07 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn2bQ56A07 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn2bQ56A07 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn2bQ56A07 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn2bQ56A07 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn2bQ56A07 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn2bQ56A07 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.34■□□□□ 0.69
Scn2bQ56A07 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.34■□□□□ 0.69
Scn2bQ56A07 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn2bQ56A07 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scn2bQ56A07 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.34■□□□□ 0.69
Scn2bQ56A07 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Scn2bQ56A07 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Scn2bQ56A07 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn2bQ56A07 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Scn2bQ56A07 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn2bQ56A07 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn2bQ56A07 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn2bQ56A07 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn2bQ56A07 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms