Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rc3h1Q4VGL6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Rc3h1Q4VGL6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.81■■□□□ 1.24
Rc3h1Q4VGL6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Rc3h1Q4VGL6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rc3h1Q4VGL6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Rc3h1Q4VGL6 Gm7291-201ENSMUST00000199147 382 ntBASIC22.8■■□□□ 1.24
Rc3h1Q4VGL6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Rc3h1Q4VGL6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rc3h1Q4VGL6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rc3h1Q4VGL6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rc3h1Q4VGL6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Rc3h1Q4VGL6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Rc3h1Q4VGL6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rc3h1Q4VGL6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rc3h1Q4VGL6 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.79■■□□□ 1.24
Rc3h1Q4VGL6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rc3h1Q4VGL6 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.79■■□□□ 1.24
Rc3h1Q4VGL6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.79■■□□□ 1.24
Rc3h1Q4VGL6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.79■■□□□ 1.24
Rc3h1Q4VGL6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.79■■□□□ 1.24
Rc3h1Q4VGL6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Rc3h1Q4VGL6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rc3h1Q4VGL6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Gm27801-201ENSMUST00000184174 223 ntBASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Gm9988-201ENSMUST00000069786 435 ntBASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
Rc3h1Q4VGL6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rc3h1Q4VGL6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rc3h1Q4VGL6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rc3h1Q4VGL6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.77■■□□□ 1.24
Rc3h1Q4VGL6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rc3h1Q4VGL6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.77■■□□□ 1.24
Rc3h1Q4VGL6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.77■■□□□ 1.24
Rc3h1Q4VGL6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rc3h1Q4VGL6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rc3h1Q4VGL6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rc3h1Q4VGL6 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.76■■□□□ 1.23
Rc3h1Q4VGL6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rc3h1Q4VGL6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rc3h1Q4VGL6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rc3h1Q4VGL6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.76■■□□□ 1.23
Rc3h1Q4VGL6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rc3h1Q4VGL6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rc3h1Q4VGL6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
Rc3h1Q4VGL6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rc3h1Q4VGL6 Gm27405-201ENSMUST00000184201 112 ntBASIC22.75■■□□□ 1.23
Rc3h1Q4VGL6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rc3h1Q4VGL6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rc3h1Q4VGL6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 AA386476-201ENSMUST00000098781 1665 ntBASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 Reep4-203ENSMUST00000226563 1444 ntBASIC22.74■■□□□ 1.23
Rc3h1Q4VGL6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.73■■□□□ 1.23
Rc3h1Q4VGL6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rc3h1Q4VGL6 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.73■■□□□ 1.23
Rc3h1Q4VGL6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rc3h1Q4VGL6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rc3h1Q4VGL6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rc3h1Q4VGL6 Gm42778-201ENSMUST00000199644 553 ntBASIC22.73■■□□□ 1.23
Rc3h1Q4VGL6 Gm18671-201ENSMUST00000214826 683 ntBASIC22.73■■□□□ 1.23
Rc3h1Q4VGL6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rc3h1Q4VGL6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rc3h1Q4VGL6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rc3h1Q4VGL6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.72■■□□□ 1.23
Rc3h1Q4VGL6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rc3h1Q4VGL6 Notumos-201ENSMUST00000151998 2659 ntBASIC22.72■■□□□ 1.23
Rc3h1Q4VGL6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rc3h1Q4VGL6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.72■■□□□ 1.23
Rc3h1Q4VGL6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rc3h1Q4VGL6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Rc3h1Q4VGL6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rc3h1Q4VGL6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rc3h1Q4VGL6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rc3h1Q4VGL6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 Gm29257-201ENSMUST00000186115 639 ntBASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 AV356131-201ENSMUST00000206201 750 ntBASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms