Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1brtQ3UNC9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1brtQ3UNC9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1brtQ3UNC9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1brtQ3UNC9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1brtQ3UNC9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1brtQ3UNC9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cks1brtQ3UNC9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1brtQ3UNC9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1brtQ3UNC9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1brtQ3UNC9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1brtQ3UNC9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
Cks1brtQ3UNC9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1brtQ3UNC9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1brtQ3UNC9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1brtQ3UNC9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1brtQ3UNC9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1brtQ3UNC9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1brtQ3UNC9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1brtQ3UNC9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1brtQ3UNC9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.2□□□□□ -0.14
Cks1brtQ3UNC9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1brtQ3UNC9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1brtQ3UNC9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.18□□□□□ -0.14
Cks1brtQ3UNC9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1brtQ3UNC9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cks1brtQ3UNC9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms