Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnrc6aQ3UHK8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Gm13148-201ENSMUST00000118892 745 ntBASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnrc6aQ3UHK8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc6aQ3UHK8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc6aQ3UHK8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.34■□□□□ 0.53
Tnrc6aQ3UHK8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc6aQ3UHK8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc6aQ3UHK8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Tnrc6aQ3UHK8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc6aQ3UHK8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc6aQ3UHK8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tnrc6aQ3UHK8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.33■□□□□ 0.53
Tnrc6aQ3UHK8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnrc6aQ3UHK8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnrc6aQ3UHK8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnrc6aQ3UHK8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnrc6aQ3UHK8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.33■□□□□ 0.52
Tnrc6aQ3UHK8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.33■□□□□ 0.52
Tnrc6aQ3UHK8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnrc6aQ3UHK8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Tnrc6aQ3UHK8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc6aQ3UHK8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc6aQ3UHK8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc6aQ3UHK8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc6aQ3UHK8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tnrc6aQ3UHK8 Gm12441-201ENSMUST00000121806 588 ntBASIC18.32■□□□□ 0.52
Tnrc6aQ3UHK8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.32■□□□□ 0.52
Tnrc6aQ3UHK8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc6aQ3UHK8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc6aQ3UHK8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tnrc6aQ3UHK8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tnrc6aQ3UHK8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc6aQ3UHK8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc6aQ3UHK8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Tnrc6aQ3UHK8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc6aQ3UHK8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc6aQ3UHK8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.31■□□□□ 0.52
Tnrc6aQ3UHK8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.31■□□□□ 0.52
Tnrc6aQ3UHK8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc6aQ3UHK8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc6aQ3UHK8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc6aQ3UHK8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc6aQ3UHK8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.3■□□□□ 0.52
Tnrc6aQ3UHK8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc6aQ3UHK8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc6aQ3UHK8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tnrc6aQ3UHK8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.3■□□□□ 0.52
Tnrc6aQ3UHK8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc6aQ3UHK8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc6aQ3UHK8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc6aQ3UHK8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Gm13146-201ENSMUST00000118508 780 ntBASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Nespas-201ENSMUST00000143738 1083 ntBASIC18.29■□□□□ 0.52
Tnrc6aQ3UHK8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 Gm7514-201ENSMUST00000209475 934 ntBASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tnrc6aQ3UHK8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnrc6aQ3UHK8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Tnrc6aQ3UHK8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.27■□□□□ 0.52
Tnrc6aQ3UHK8 Gm10602-201ENSMUST00000098239 609 ntBASIC18.27■□□□□ 0.52
Tnrc6aQ3UHK8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnrc6aQ3UHK8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnrc6aQ3UHK8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tnrc6aQ3UHK8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnrc6aQ3UHK8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.26■□□□□ 0.51
Tnrc6aQ3UHK8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.26■□□□□ 0.51
Tnrc6aQ3UHK8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnrc6aQ3UHK8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms