Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf44Q3UHJ8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf44Q3UHJ8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Rnf44Q3UHJ8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf44Q3UHJ8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf44Q3UHJ8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.98■□□□□ 0.63
Rnf44Q3UHJ8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rnf44Q3UHJ8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf44Q3UHJ8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf44Q3UHJ8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf44Q3UHJ8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Rnf44Q3UHJ8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf44Q3UHJ8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf44Q3UHJ8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf44Q3UHJ8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rnf44Q3UHJ8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf44Q3UHJ8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf44Q3UHJ8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf44Q3UHJ8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf44Q3UHJ8 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.97■□□□□ 0.63
Rnf44Q3UHJ8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf44Q3UHJ8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf44Q3UHJ8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Gm43017-201ENSMUST00000198296 752 ntBASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf44Q3UHJ8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf44Q3UHJ8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf44Q3UHJ8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Smad6-203ENSMUST00000179458 273 ntBASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf44Q3UHJ8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf44Q3UHJ8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf44Q3UHJ8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms