Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Spg11Q3UHA3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Spg11Q3UHA3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Spg11Q3UHA3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Spg11Q3UHA3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Spg11Q3UHA3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.46■□□□□ 0.55
Spg11Q3UHA3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.45■□□□□ 0.54
Spg11Q3UHA3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Spg11Q3UHA3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.45■□□□□ 0.54
Spg11Q3UHA3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Spg11Q3UHA3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Spg11Q3UHA3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Spg11Q3UHA3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Spg11Q3UHA3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Spg11Q3UHA3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Spg11Q3UHA3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Spg11Q3UHA3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Spg11Q3UHA3 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.44■□□□□ 0.54
Spg11Q3UHA3 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.44■□□□□ 0.54
Spg11Q3UHA3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Spg11Q3UHA3 Gm10698-201ENSMUST00000182663 604 ntBASIC18.44■□□□□ 0.54
Spg11Q3UHA3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.44■□□□□ 0.54
Spg11Q3UHA3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Spg11Q3UHA3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Spg11Q3UHA3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Spg11Q3UHA3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Spg11Q3UHA3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Spg11Q3UHA3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Spg11Q3UHA3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.43■□□□□ 0.54
Spg11Q3UHA3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Spg11Q3UHA3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Spg11Q3UHA3 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.43■□□□□ 0.54
Spg11Q3UHA3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.43■□□□□ 0.54
Spg11Q3UHA3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.43■□□□□ 0.54
Spg11Q3UHA3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Spg11Q3UHA3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Spg11Q3UHA3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Spg11Q3UHA3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Spg11Q3UHA3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Spg11Q3UHA3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Spg11Q3UHA3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Spg11Q3UHA3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Spg11Q3UHA3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Spg11Q3UHA3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Spg11Q3UHA3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Spg11Q3UHA3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Spg11Q3UHA3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Spg11Q3UHA3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Spg11Q3UHA3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Spg11Q3UHA3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.41■□□□□ 0.54
Spg11Q3UHA3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Spg11Q3UHA3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Spg11Q3UHA3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.41■□□□□ 0.54
Spg11Q3UHA3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Spg11Q3UHA3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Spg11Q3UHA3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Spg11Q3UHA3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.4■□□□□ 0.54
Spg11Q3UHA3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Spg11Q3UHA3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.4■□□□□ 0.54
Spg11Q3UHA3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Spg11Q3UHA3 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.4■□□□□ 0.54
Spg11Q3UHA3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Spg11Q3UHA3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.4■□□□□ 0.54
Spg11Q3UHA3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Spg11Q3UHA3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Spg11Q3UHA3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Gm2559-201ENSMUST00000201323 363 ntBASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Spg11Q3UHA3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg11Q3UHA3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.38■□□□□ 0.53
Spg11Q3UHA3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg11Q3UHA3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Spg11Q3UHA3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg11Q3UHA3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Spg11Q3UHA3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg11Q3UHA3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.38■□□□□ 0.53
Spg11Q3UHA3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.38■□□□□ 0.53
Spg11Q3UHA3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.38■□□□□ 0.53
Spg11Q3UHA3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg11Q3UHA3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Spg11Q3UHA3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Spg11Q3UHA3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Spg11Q3UHA3 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.37■□□□□ 0.53
Spg11Q3UHA3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Spg11Q3UHA3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.37■□□□□ 0.53
Spg11Q3UHA3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg11Q3UHA3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms