Protein–RNA interactions for Protein: Q3UH99

Shisa6, Protein shisa-6 homolog, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa6Q3UH99 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa6Q3UH99 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa6Q3UH99 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa6Q3UH99 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa6Q3UH99 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.87■□□□□ 0.45
Shisa6Q3UH99 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.87■□□□□ 0.45
Shisa6Q3UH99 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa6Q3UH99 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa6Q3UH99 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa6Q3UH99 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa6Q3UH99 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa6Q3UH99 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa6Q3UH99 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa6Q3UH99 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa6Q3UH99 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.85■□□□□ 0.45
Shisa6Q3UH99 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa6Q3UH99 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa6Q3UH99 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa6Q3UH99 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa6Q3UH99 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Shisa6Q3UH99 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa6Q3UH99 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.84■□□□□ 0.45
Shisa6Q3UH99 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa6Q3UH99 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Shisa6Q3UH99 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shisa6Q3UH99 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shisa6Q3UH99 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.83■□□□□ 0.45
Shisa6Q3UH99 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa6Q3UH99 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.82■□□□□ 0.44
Shisa6Q3UH99 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa6Q3UH99 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa6Q3UH99 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa6Q3UH99 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Shisa6Q3UH99 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.82■□□□□ 0.44
Shisa6Q3UH99 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa6Q3UH99 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa6Q3UH99 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Shisa6Q3UH99 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa6Q3UH99 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.81■□□□□ 0.44
Shisa6Q3UH99 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa6Q3UH99 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.81■□□□□ 0.44
Shisa6Q3UH99 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa6Q3UH99 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa6Q3UH99 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa6Q3UH99 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa6Q3UH99 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.81■□□□□ 0.44
Shisa6Q3UH99 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa6Q3UH99 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Shisa6Q3UH99 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.81■□□□□ 0.44
Shisa6Q3UH99 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.8■□□□□ 0.44
Shisa6Q3UH99 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.8■□□□□ 0.44
Shisa6Q3UH99 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa6Q3UH99 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa6Q3UH99 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.8■□□□□ 0.44
Shisa6Q3UH99 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.8■□□□□ 0.44
Shisa6Q3UH99 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa6Q3UH99 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa6Q3UH99 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Shisa6Q3UH99 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa6Q3UH99 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Shisa6Q3UH99 AA386476-201ENSMUST00000098781 1665 ntBASIC17.8■□□□□ 0.44
Shisa6Q3UH99 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa6Q3UH99 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Shisa6Q3UH99 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa6Q3UH99 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.79■□□□□ 0.44
Shisa6Q3UH99 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa6Q3UH99 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa6Q3UH99 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa6Q3UH99 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
Shisa6Q3UH99 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa6Q3UH99 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa6Q3UH99 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa6Q3UH99 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa6Q3UH99 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa6Q3UH99 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa6Q3UH99 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.78■□□□□ 0.44
Shisa6Q3UH99 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.78■□□□□ 0.44
Shisa6Q3UH99 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms