Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.12■■□□□ 1.29
Limch1Q3UH68 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.12■■□□□ 1.29
Limch1Q3UH68 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Limch1Q3UH68 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Limch1Q3UH68 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Limch1Q3UH68 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.11■■□□□ 1.29
Limch1Q3UH68 Gm43017-201ENSMUST00000198296 752 ntBASIC23.11■■□□□ 1.29
Limch1Q3UH68 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Limch1Q3UH68 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Limch1Q3UH68 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Limch1Q3UH68 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.1■■□□□ 1.29
Limch1Q3UH68 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.1■■□□□ 1.29
Limch1Q3UH68 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Limch1Q3UH68 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Limch1Q3UH68 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.1■■□□□ 1.29
Limch1Q3UH68 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Limch1Q3UH68 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Limch1Q3UH68 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC23.09■■□□□ 1.29
Limch1Q3UH68 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Limch1Q3UH68 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Limch1Q3UH68 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.09■■□□□ 1.29
Limch1Q3UH68 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Limch1Q3UH68 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Limch1Q3UH68 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Limch1Q3UH68 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Limch1Q3UH68 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Limch1Q3UH68 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Limch1Q3UH68 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Limch1Q3UH68 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Limch1Q3UH68 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Limch1Q3UH68 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.08■■□□□ 1.29
Limch1Q3UH68 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.08■■□□□ 1.29
Limch1Q3UH68 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Limch1Q3UH68 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Limch1Q3UH68 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Limch1Q3UH68 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Limch1Q3UH68 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Limch1Q3UH68 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.07■■□□□ 1.28
Limch1Q3UH68 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Limch1Q3UH68 Gm8493-201ENSMUST00000196881 489 ntBASIC23.07■■□□□ 1.28
Limch1Q3UH68 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Limch1Q3UH68 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Limch1Q3UH68 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Limch1Q3UH68 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Limch1Q3UH68 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Limch1Q3UH68 Golph3-202ENSMUST00000226517 2359 ntBASIC23.05■■□□□ 1.28
Limch1Q3UH68 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Limch1Q3UH68 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Limch1Q3UH68 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Limch1Q3UH68 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Limch1Q3UH68 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Limch1Q3UH68 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Limch1Q3UH68 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Limch1Q3UH68 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.05■■□□□ 1.28
Limch1Q3UH68 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Limch1Q3UH68 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.04■■□□□ 1.28
Limch1Q3UH68 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Limch1Q3UH68 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.04■■□□□ 1.28
Limch1Q3UH68 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.04■■□□□ 1.28
Limch1Q3UH68 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Limch1Q3UH68 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Limch1Q3UH68 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Limch1Q3UH68 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Limch1Q3UH68 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Limch1Q3UH68 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Limch1Q3UH68 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Limch1Q3UH68 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Limch1Q3UH68 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.03■■□□□ 1.28
Limch1Q3UH68 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
Limch1Q3UH68 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.03■■□□□ 1.28
Limch1Q3UH68 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Limch1Q3UH68 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Limch1Q3UH68 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Limch1Q3UH68 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Limch1Q3UH68 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Limch1Q3UH68 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Limch1Q3UH68 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Limch1Q3UH68 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Limch1Q3UH68 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Limch1Q3UH68 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Limch1Q3UH68 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Limch1Q3UH68 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Limch1Q3UH68 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Limch1Q3UH68 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Limch1Q3UH68 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Limch1Q3UH68 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms