Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.06■□□□□ 0.32
Q3U1D9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3U1D9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3U1D9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q3U1D9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q3U1D9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3U1D9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Q3U1D9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Q3U1D9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3U1D9 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.05■□□□□ 0.32
Q3U1D9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.05■□□□□ 0.32
Q3U1D9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.05■□□□□ 0.32
Q3U1D9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3U1D9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Q3U1D9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Q3U1D9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3U1D9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q3U1D9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Q3U1D9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.05■□□□□ 0.32
Q3U1D9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q3U1D9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Q3U1D9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Q3U1D9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3U1D9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3U1D9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3U1D9 Gm26571-201ENSMUST00000181399 666 ntBASIC17.04■□□□□ 0.32
Q3U1D9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Q3U1D9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Q3U1D9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3U1D9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Q3U1D9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3U1D9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Q3U1D9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Q3U1D9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3U1D9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.03■□□□□ 0.32
Q3U1D9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Q3U1D9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3U1D9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3U1D9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Q3U1D9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Q3U1D9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3U1D9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3U1D9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3U1D9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Q3U1D9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3U1D9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3U1D9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Q3U1D9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
Q3U1D9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q3U1D9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q3U1D9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q3U1D9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.02■□□□□ 0.32
Q3U1D9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.02■□□□□ 0.32
Q3U1D9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Q3U1D9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q3U1D9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Q3U1D9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Q3U1D9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Q3U1D9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3U1D9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3U1D9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Q3U1D9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3U1D9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3U1D9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Q3U1D9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.01■□□□□ 0.31
Q3U1D9 AV356131-201ENSMUST00000206201 750 ntBASIC17.01■□□□□ 0.31
Q3U1D9 Gm10033-202ENSMUST00000211874 928 ntBASIC17.01■□□□□ 0.31
Q3U1D9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Q3U1D9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Q3U1D9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3U1D9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3U1D9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3U1D9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q3U1D9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17■□□□□ 0.31
Q3U1D9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17■□□□□ 0.31
Q3U1D9 Gm15043-201ENSMUST00000118843 1543 ntBASIC17■□□□□ 0.31
Q3U1D9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q3U1D9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q3U1D9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Q3U1D9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.99■□□□□ 0.31
Q3U1D9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Q3U1D9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q3U1D9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q3U1D9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q3U1D9 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.99■□□□□ 0.31
Q3U1D9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Q3U1D9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.99■□□□□ 0.31
Q3U1D9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Q3U1D9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Q3U1D9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q3U1D9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q3U1D9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Q3U1D9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Q3U1D9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q3U1D9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms