Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 Gm10493-201ENSMUST00000097270 612 ntBASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shcbp1lQ3TTP0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shcbp1lQ3TTP0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shcbp1lQ3TTP0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Shcbp1lQ3TTP0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Shcbp1lQ3TTP0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shcbp1lQ3TTP0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shcbp1lQ3TTP0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shcbp1lQ3TTP0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Shcbp1lQ3TTP0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shcbp1lQ3TTP0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shcbp1lQ3TTP0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shcbp1lQ3TTP0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Shcbp1lQ3TTP0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shcbp1lQ3TTP0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shcbp1lQ3TTP0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shcbp1lQ3TTP0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shcbp1lQ3TTP0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shcbp1lQ3TTP0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.7■□□□□ 0.74
Shcbp1lQ3TTP0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Shcbp1lQ3TTP0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shcbp1lQ3TTP0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Shcbp1lQ3TTP0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Shcbp1lQ3TTP0 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.68■□□□□ 0.74
Shcbp1lQ3TTP0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.68■□□□□ 0.74
Shcbp1lQ3TTP0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shcbp1lQ3TTP0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shcbp1lQ3TTP0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shcbp1lQ3TTP0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.68■□□□□ 0.74
Shcbp1lQ3TTP0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shcbp1lQ3TTP0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shcbp1lQ3TTP0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.67■□□□□ 0.74
Shcbp1lQ3TTP0 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.67■□□□□ 0.74
Shcbp1lQ3TTP0 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.67■□□□□ 0.74
Shcbp1lQ3TTP0 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.67■□□□□ 0.74
Shcbp1lQ3TTP0 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.67■□□□□ 0.74
Shcbp1lQ3TTP0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shcbp1lQ3TTP0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shcbp1lQ3TTP0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shcbp1lQ3TTP0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms