Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Etf1-202ENSMUST00000180351 108 ntBASIC19.29■□□□□ 0.68
Q3KNL4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q3KNL4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.29■□□□□ 0.68
Q3KNL4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Q3KNL4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Q3KNL4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Q3KNL4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q3KNL4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q3KNL4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q3KNL4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q3KNL4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Q3KNL4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Q3KNL4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q3KNL4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q3KNL4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Q3KNL4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Q3KNL4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q3KNL4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q3KNL4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q3KNL4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q3KNL4 Gm43530-201ENSMUST00000195920 274 ntBASIC19.27■□□□□ 0.68
Q3KNL4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Q3KNL4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q3KNL4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q3KNL4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q3KNL4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Q3KNL4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
Q3KNL4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Q3KNL4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.26■□□□□ 0.67
Q3KNL4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q3KNL4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q3KNL4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q3KNL4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Q3KNL4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q3KNL4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3KNL4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.25■□□□□ 0.67
Q3KNL4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3KNL4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3KNL4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3KNL4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3KNL4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3KNL4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Q3KNL4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3KNL4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3KNL4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q3KNL4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3KNL4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Q3KNL4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q3KNL4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.24■□□□□ 0.67
Q3KNL4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.24■□□□□ 0.67
Q3KNL4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Q3KNL4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q3KNL4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q3KNL4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q3KNL4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q3KNL4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q3KNL4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Q3KNL4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q3KNL4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q3KNL4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q3KNL4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.23■□□□□ 0.67
Q3KNL4 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.23■□□□□ 0.67
Q3KNL4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.23■□□□□ 0.67
Q3KNL4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q3KNL4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q3KNL4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q3KNL4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q3KNL4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q3KNL4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q3KNL4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q3KNL4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q3KNL4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q3KNL4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.22■□□□□ 0.67
Q3KNL4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Q3KNL4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q3KNL4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Q3KNL4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Q3KNL4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q3KNL4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Q3KNL4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Q3KNL4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Q3KNL4 Iqck-206ENSMUST00000208658 2891 ntBASIC19.21■□□□□ 0.67
Q3KNL4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.21■□□□□ 0.67
Q3KNL4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q3KNL4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q3KNL4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q3KNL4 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.21■□□□□ 0.67
Q3KNL4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q3KNL4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q3KNL4 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.2■□□□□ 0.66
Q3KNL4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Q3KNL4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Q3KNL4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Q3KNL4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q3KNL4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q3KNL4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Q3KNL4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q3KNL4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Q3KNL4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms