Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.65■□□□□ 0.42
Pkd1l3Q2EG98 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.64■□□□□ 0.42
Pkd1l3Q2EG98 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pkd1l3Q2EG98 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pkd1l3Q2EG98 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pkd1l3Q2EG98 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Pkd1l3Q2EG98 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pkd1l3Q2EG98 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pkd1l3Q2EG98 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pkd1l3Q2EG98 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pkd1l3Q2EG98 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkd1l3Q2EG98 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkd1l3Q2EG98 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pkd1l3Q2EG98 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkd1l3Q2EG98 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkd1l3Q2EG98 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkd1l3Q2EG98 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pkd1l3Q2EG98 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkd1l3Q2EG98 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkd1l3Q2EG98 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pkd1l3Q2EG98 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkd1l3Q2EG98 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pkd1l3Q2EG98 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pkd1l3Q2EG98 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pkd1l3Q2EG98 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pkd1l3Q2EG98 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Pkd1l3Q2EG98 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pkd1l3Q2EG98 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pkd1l3Q2EG98 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pkd1l3Q2EG98 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pkd1l3Q2EG98 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.6■□□□□ 0.41
Pkd1l3Q2EG98 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Pkd1l3Q2EG98 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pkd1l3Q2EG98 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pkd1l3Q2EG98 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pkd1l3Q2EG98 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pkd1l3Q2EG98 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.6■□□□□ 0.41
Pkd1l3Q2EG98 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.6■□□□□ 0.41
Pkd1l3Q2EG98 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pkd1l3Q2EG98 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pkd1l3Q2EG98 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pkd1l3Q2EG98 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pkd1l3Q2EG98 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pkd1l3Q2EG98 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pkd1l3Q2EG98 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pkd1l3Q2EG98 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pkd1l3Q2EG98 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pkd1l3Q2EG98 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pkd1l3Q2EG98 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pkd1l3Q2EG98 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pkd1l3Q2EG98 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pkd1l3Q2EG98 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pkd1l3Q2EG98 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pkd1l3Q2EG98 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Gm9988-201ENSMUST00000069786 435 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms