Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.81■□□□□ 0.28
Smn1P97801 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.81■□□□□ 0.28
Smn1P97801 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smn1P97801 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smn1P97801 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Smn1P97801 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.8■□□□□ 0.28
Smn1P97801 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smn1P97801 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smn1P97801 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.79■□□□□ 0.28
Smn1P97801 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.79■□□□□ 0.28
Smn1P97801 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smn1P97801 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smn1P97801 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smn1P97801 Gm7143-201ENSMUST00000222811 859 ntBASIC16.79■□□□□ 0.28
Smn1P97801 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smn1P97801 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smn1P97801 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smn1P97801 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smn1P97801 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smn1P97801 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smn1P97801 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smn1P97801 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smn1P97801 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smn1P97801 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smn1P97801 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smn1P97801 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smn1P97801 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smn1P97801 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smn1P97801 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.78■□□□□ 0.28
Smn1P97801 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smn1P97801 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Smn1P97801 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smn1P97801 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Smn1P97801 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smn1P97801 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smn1P97801 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smn1P97801 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.77■□□□□ 0.28
Smn1P97801 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smn1P97801 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smn1P97801 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Smn1P97801 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smn1P97801 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smn1P97801 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smn1P97801 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smn1P97801 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.76■□□□□ 0.27
Smn1P97801 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.76■□□□□ 0.27
Smn1P97801 Gm43566-201ENSMUST00000196851 808 ntBASIC16.76■□□□□ 0.27
Smn1P97801 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smn1P97801 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smn1P97801 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smn1P97801 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smn1P97801 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smn1P97801 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smn1P97801 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smn1P97801 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smn1P97801 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.75■□□□□ 0.27
Smn1P97801 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smn1P97801 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
Smn1P97801 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.75■□□□□ 0.27
Smn1P97801 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smn1P97801 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smn1P97801 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smn1P97801 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smn1P97801 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smn1P97801 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.74■□□□□ 0.27
Smn1P97801 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smn1P97801 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smn1P97801 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.74■□□□□ 0.27
Smn1P97801 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smn1P97801 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smn1P97801 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smn1P97801 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smn1P97801 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smn1P97801 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smn1P97801 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smn1P97801 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smn1P97801 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smn1P97801 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.73■□□□□ 0.27
Smn1P97801 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smn1P97801 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smn1P97801 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smn1P97801 Gm10232-201ENSMUST00000089221 720 ntBASIC16.73■□□□□ 0.27
Smn1P97801 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Smn1P97801 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smn1P97801 Cap2-205ENSMUST00000225824 1634 ntBASIC16.73■□□□□ 0.27
Smn1P97801 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smn1P97801 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smn1P97801 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.73■□□□□ 0.27
Smn1P97801 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms