Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smad4P97471 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad4P97471 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad4P97471 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad4P97471 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad4P97471 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smad4P97471 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad4P97471 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smad4P97471 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smad4P97471 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.89■□□□□ 0.77
Smad4P97471 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smad4P97471 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smad4P97471 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smad4P97471 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smad4P97471 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smad4P97471 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smad4P97471 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smad4P97471 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smad4P97471 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smad4P97471 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smad4P97471 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smad4P97471 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smad4P97471 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smad4P97471 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smad4P97471 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smad4P97471 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smad4P97471 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad4P97471 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad4P97471 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Smad4P97471 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.87■□□□□ 0.77
Smad4P97471 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.87■□□□□ 0.77
Smad4P97471 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.87■□□□□ 0.77
Smad4P97471 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.87■□□□□ 0.77
Smad4P97471 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Smad4P97471 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad4P97471 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad4P97471 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad4P97471 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smad4P97471 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smad4P97471 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smad4P97471 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.86■□□□□ 0.77
Smad4P97471 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smad4P97471 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smad4P97471 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smad4P97471 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smad4P97471 Gm5643-201ENSMUST00000117081 966 ntBASIC19.85■□□□□ 0.77
Smad4P97471 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smad4P97471 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smad4P97471 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smad4P97471 Gm715-201ENSMUST00000117865 831 ntBASIC19.84■□□□□ 0.77
Smad4P97471 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smad4P97471 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Smad4P97471 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smad4P97471 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smad4P97471 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smad4P97471 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.83■□□□□ 0.77
Smad4P97471 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smad4P97471 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smad4P97471 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Smad4P97471 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Smad4P97471 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smad4P97471 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smad4P97471 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smad4P97471 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smad4P97471 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smad4P97471 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.82■□□□□ 0.76
Smad4P97471 Gm12896-201ENSMUST00000118430 226 ntBASIC19.82■□□□□ 0.76
Smad4P97471 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Smad4P97471 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smad4P97471 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smad4P97471 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smad4P97471 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smad4P97471 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Smad4P97471 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smad4P97471 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smad4P97471 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smad4P97471 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.81■□□□□ 0.76
Smad4P97471 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smad4P97471 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smad4P97471 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smad4P97471 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Smad4P97471 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smad4P97471 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.81■□□□□ 0.76
Smad4P97471 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smad4P97471 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smad4P97471 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smad4P97471 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smad4P97471 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
Smad4P97471 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smad4P97471 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smad4P97471 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.8■□□□□ 0.76
Smad4P97471 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.8■□□□□ 0.76
Smad4P97471 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.8■□□□□ 0.76
Smad4P97471 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.8■□□□□ 0.76
Smad4P97471 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smad4P97471 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.8■□□□□ 0.76
Smad4P97471 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smad4P97471 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smad4P97471 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smad4P97471 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms