Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim43bP86448 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim43bP86448 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim43bP86448 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.11■□□□□ 0.81
Trim43bP86448 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim43bP86448 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim43bP86448 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim43bP86448 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim43bP86448 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43bP86448 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43bP86448 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Trim43bP86448 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
Trim43bP86448 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43bP86448 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43bP86448 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43bP86448 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43bP86448 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43bP86448 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43bP86448 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43bP86448 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.1■□□□□ 0.81
Trim43bP86448 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43bP86448 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Trim43bP86448 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43bP86448 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43bP86448 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim43bP86448 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43bP86448 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43bP86448 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Trim43bP86448 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43bP86448 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43bP86448 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim43bP86448 Golgb1-201ENSMUST00000023534 498 ntBASIC20.08■□□□□ 0.81
Trim43bP86448 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim43bP86448 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim43bP86448 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim43bP86448 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim43bP86448 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim43bP86448 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Trim43bP86448 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43bP86448 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim43bP86448 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim43bP86448 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.07■□□□□ 0.8
Trim43bP86448 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43bP86448 Gm9870-201ENSMUST00000063874 645 ntBASIC20.07■□□□□ 0.8
Trim43bP86448 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43bP86448 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43bP86448 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43bP86448 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43bP86448 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43bP86448 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43bP86448 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Trim43bP86448 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43bP86448 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43bP86448 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim43bP86448 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim43bP86448 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43bP86448 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43bP86448 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim43bP86448 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43bP86448 Gm12821-201ENSMUST00000120022 600 ntBASIC20.05■□□□□ 0.8
Trim43bP86448 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43bP86448 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43bP86448 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43bP86448 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43bP86448 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43bP86448 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43bP86448 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43bP86448 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim43bP86448 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43bP86448 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43bP86448 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43bP86448 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43bP86448 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43bP86448 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43bP86448 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43bP86448 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43bP86448 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43bP86448 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43bP86448 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim43bP86448 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43bP86448 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43bP86448 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.02■□□□□ 0.8
Trim43bP86448 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43bP86448 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim43bP86448 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43bP86448 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.02■□□□□ 0.8
Trim43bP86448 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.02■□□□□ 0.8
Trim43bP86448 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.02■□□□□ 0.8
Trim43bP86448 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43bP86448 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43bP86448 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43bP86448 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim43bP86448 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim43bP86448 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.02■□□□□ 0.79
Trim43bP86448 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43bP86448 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43bP86448 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43bP86448 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43bP86448 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43bP86448 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms