Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h3aP68433 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h3aP68433 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h3aP68433 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Hist1h3aP68433 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h3aP68433 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.11■□□□□ 0.33
Hist1h3aP68433 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.11■□□□□ 0.33
Hist1h3aP68433 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Hist1h3aP68433 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.1■□□□□ 0.33
Hist1h3aP68433 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Gm21956-201ENSMUST00000179946 522 ntBASIC17.1■□□□□ 0.33
Hist1h3aP68433 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Gm13241-201ENSMUST00000094493 780 ntBASIC17.1■□□□□ 0.33
Hist1h3aP68433 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h3aP68433 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.09■□□□□ 0.33
Hist1h3aP68433 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hist1h3aP68433 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.09■□□□□ 0.33
Hist1h3aP68433 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.09■□□□□ 0.33
Hist1h3aP68433 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h3aP68433 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h3aP68433 AA386476-201ENSMUST00000098781 1665 ntBASIC17.09■□□□□ 0.33
Hist1h3aP68433 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h3aP68433 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h3aP68433 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h3aP68433 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h3aP68433 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h3aP68433 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hist1h3aP68433 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hist1h3aP68433 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.08■□□□□ 0.33
Hist1h3aP68433 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hist1h3aP68433 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h3aP68433 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h3aP68433 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h3aP68433 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Hist1h3aP68433 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.08■□□□□ 0.32
Hist1h3aP68433 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hist1h3aP68433 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h3aP68433 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h3aP68433 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h3aP68433 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h3aP68433 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.07■□□□□ 0.32
Hist1h3aP68433 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h3aP68433 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Hist1h3aP68433 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h3aP68433 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.07■□□□□ 0.32
Hist1h3aP68433 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h3aP68433 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h3aP68433 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h3aP68433 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h3aP68433 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h3aP68433 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.06■□□□□ 0.32
Hist1h3aP68433 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h3aP68433 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hist1h3aP68433 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h3aP68433 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h3aP68433 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h3aP68433 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h3aP68433 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h3aP68433 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.06■□□□□ 0.32
Hist1h3aP68433 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h3aP68433 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h3aP68433 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h3aP68433 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h3aP68433 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h3aP68433 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h3aP68433 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.05■□□□□ 0.32
Hist1h3aP68433 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h3aP68433 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h3aP68433 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.05■□□□□ 0.32
Hist1h3aP68433 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h3aP68433 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hist1h3aP68433 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h3aP68433 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms