Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39P62892 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.97□□□□□ -0.17
Rpl39P62892 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39P62892 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39P62892 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39P62892 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39P62892 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Rpl39P62892 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Rpl39P62892 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpl39P62892 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpl39P62892 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.96□□□□□ -0.17
Rpl39P62892 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Rpl39P62892 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpl39P62892 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Rpl39P62892 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpl39P62892 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpl39P62892 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpl39P62892 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Rpl39P62892 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.96□□□□□ -0.18
Rpl39P62892 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpl39P62892 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rpl39P62892 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rpl39P62892 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rpl39P62892 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rpl39P62892 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpl39P62892 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Rpl39P62892 Gm11175-201ENSMUST00000116172 543 ntBASIC13.94□□□□□ -0.18
Rpl39P62892 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rpl39P62892 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC13.94□□□□□ -0.18
Rpl39P62892 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.94□□□□□ -0.18
Rpl39P62892 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.94□□□□□ -0.18
Rpl39P62892 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpl39P62892 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rpl39P62892 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rpl39P62892 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rpl39P62892 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rpl39P62892 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpl39P62892 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpl39P62892 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpl39P62892 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Rpl39P62892 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpl39P62892 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpl39P62892 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Rpl39P62892 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpl39P62892 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpl39P62892 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.92□□□□□ -0.18
Rpl39P62892 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rpl39P62892 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpl39P62892 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rpl39P62892 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpl39P62892 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms