Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp46P62069 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Usp46P62069 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp46P62069 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp46P62069 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Usp46P62069 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.53■□□□□ 0.88
Usp46P62069 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp46P62069 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp46P62069 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp46P62069 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Usp46P62069 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp46P62069 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Usp46P62069 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Usp46P62069 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.52■□□□□ 0.88
Usp46P62069 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp46P62069 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Usp46P62069 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp46P62069 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Usp46P62069 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp46P62069 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp46P62069 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp46P62069 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp46P62069 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp46P62069 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.51■□□□□ 0.87
Usp46P62069 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp46P62069 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp46P62069 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.51■□□□□ 0.87
Usp46P62069 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.51■□□□□ 0.87
Usp46P62069 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp46P62069 Gm10493-201ENSMUST00000097270 612 ntBASIC20.51■□□□□ 0.87
Usp46P62069 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp46P62069 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp46P62069 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp46P62069 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Usp46P62069 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp46P62069 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp46P62069 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Usp46P62069 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp46P62069 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.5■□□□□ 0.87
Usp46P62069 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp46P62069 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp46P62069 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp46P62069 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp46P62069 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp46P62069 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Usp46P62069 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp46P62069 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp46P62069 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Usp46P62069 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Usp46P62069 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.49■□□□□ 0.87
Usp46P62069 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp46P62069 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp46P62069 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp46P62069 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp46P62069 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp46P62069 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Usp46P62069 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.48■□□□□ 0.87
Usp46P62069 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
Usp46P62069 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp46P62069 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Usp46P62069 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Usp46P62069 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp46P62069 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.47■□□□□ 0.87
Usp46P62069 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp46P62069 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp46P62069 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp46P62069 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp46P62069 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.46■□□□□ 0.87
Usp46P62069 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.46■□□□□ 0.87
Usp46P62069 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.46■□□□□ 0.87
Usp46P62069 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp46P62069 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Usp46P62069 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp46P62069 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp46P62069 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp46P62069 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp46P62069 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp46P62069 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp46P62069 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Usp46P62069 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.45■□□□□ 0.86
Usp46P62069 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp46P62069 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp46P62069 Gm26571-201ENSMUST00000181399 666 ntBASIC20.45■□□□□ 0.86
Usp46P62069 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.45■□□□□ 0.86
Usp46P62069 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.45■□□□□ 0.86
Usp46P62069 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.45■□□□□ 0.86
Usp46P62069 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp46P62069 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.45■□□□□ 0.86
Usp46P62069 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp46P62069 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.45■□□□□ 0.86
Usp46P62069 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp46P62069 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp46P62069 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.45■□□□□ 0.86
Usp46P62069 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp46P62069 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp46P62069 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Usp46P62069 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.44■□□□□ 0.86
Usp46P62069 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp46P62069 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp46P62069 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms