Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gm43017-201ENSMUST00000198296 752 ntBASIC17.65■□□□□ 0.42
Cldn18P56857 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn18P56857 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cldn18P56857 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Cldn18P56857 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.65■□□□□ 0.42
Cldn18P56857 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn18P56857 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Cldn18P56857 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.64■□□□□ 0.42
Cldn18P56857 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cldn18P56857 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cldn18P56857 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn18P56857 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Cldn18P56857 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn18P56857 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cldn18P56857 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn18P56857 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn18P56857 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.64■□□□□ 0.41
Cldn18P56857 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn18P56857 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn18P56857 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn18P56857 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.63■□□□□ 0.41
Cldn18P56857 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.63■□□□□ 0.41
Cldn18P56857 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Cldn18P56857 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.63■□□□□ 0.41
Cldn18P56857 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn18P56857 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn18P56857 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn18P56857 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Cldn18P56857 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn18P56857 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn18P56857 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn18P56857 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn18P56857 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn18P56857 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Cldn18P56857 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn18P56857 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn18P56857 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cldn18P56857 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn18P56857 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn18P56857 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn18P56857 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn18P56857 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn18P56857 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn18P56857 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn18P56857 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn18P56857 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn18P56857 AA386476-201ENSMUST00000098781 1665 ntBASIC17.61■□□□□ 0.41
Cldn18P56857 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn18P56857 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cldn18P56857 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.61■□□□□ 0.41
Cldn18P56857 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn18P56857 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn18P56857 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn18P56857 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.61■□□□□ 0.41
Cldn18P56857 Smad6-203ENSMUST00000179458 273 ntBASIC17.61■□□□□ 0.41
Cldn18P56857 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn18P56857 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn18P56857 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn18P56857 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn18P56857 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.6■□□□□ 0.41
Cldn18P56857 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.6■□□□□ 0.41
Cldn18P56857 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn18P56857 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn18P56857 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn18P56857 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn18P56857 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn18P56857 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn18P56857 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn18P56857 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn18P56857 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn18P56857 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn18P56857 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn18P56857 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn18P56857 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn18P56857 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cldn18P56857 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.59■□□□□ 0.41
Cldn18P56857 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Cldn18P56857 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn18P56857 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Cldn18P56857 Serp2-204ENSMUST00000228055 705 ntBASIC17.59■□□□□ 0.41
Cldn18P56857 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn18P56857 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cldn18P56857 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn18P56857 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn18P56857 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn18P56857 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn18P56857 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.58■□□□□ 0.4
Cldn18P56857 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.58■□□□□ 0.4
Cldn18P56857 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn18P56857 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cldn18P56857 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn18P56857 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn18P56857 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.58■□□□□ 0.4
Cldn18P56857 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn18P56857 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Cldn18P56857 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cldn18P56857 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.57■□□□□ 0.4
Cldn18P56857 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn18P56857 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cldn18P56857 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms