Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh11P55288 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh11P55288 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh11P55288 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdh11P55288 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh11P55288 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.82■□□□□ 0.44
Cdh11P55288 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdh11P55288 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh11P55288 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh11P55288 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh11P55288 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh11P55288 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh11P55288 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdh11P55288 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh11P55288 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.81■□□□□ 0.44
Cdh11P55288 Golgb1-201ENSMUST00000023534 498 ntBASIC17.81■□□□□ 0.44
Cdh11P55288 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Cdh11P55288 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh11P55288 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh11P55288 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh11P55288 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh11P55288 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Cdh11P55288 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cdh11P55288 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh11P55288 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.8■□□□□ 0.44
Cdh11P55288 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.8■□□□□ 0.44
Cdh11P55288 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh11P55288 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cdh11P55288 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh11P55288 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.8■□□□□ 0.44
Cdh11P55288 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh11P55288 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh11P55288 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Cdh11P55288 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh11P55288 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh11P55288 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh11P55288 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdh11P55288 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Cdh11P55288 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh11P55288 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh11P55288 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh11P55288 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdh11P55288 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdh11P55288 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.79■□□□□ 0.44
Cdh11P55288 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
Cdh11P55288 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh11P55288 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdh11P55288 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cdh11P55288 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh11P55288 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh11P55288 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh11P55288 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh11P55288 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh11P55288 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cdh11P55288 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cdh11P55288 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cdh11P55288 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.78■□□□□ 0.44
Cdh11P55288 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh11P55288 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh11P55288 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh11P55288 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh11P55288 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh11P55288 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh11P55288 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cdh11P55288 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh11P55288 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh11P55288 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.77■□□□□ 0.44
Cdh11P55288 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh11P55288 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh11P55288 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh11P55288 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh11P55288 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Cdh11P55288 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.76■□□□□ 0.43
Cdh11P55288 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh11P55288 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cdh11P55288 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cdh11P55288 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh11P55288 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh11P55288 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cdh11P55288 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh11P55288 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh11P55288 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh11P55288 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.75■□□□□ 0.43
Cdh11P55288 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh11P55288 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh11P55288 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.75■□□□□ 0.43
Cdh11P55288 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh11P55288 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cdh11P55288 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Cdh11P55288 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.74■□□□□ 0.43
Cdh11P55288 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.74■□□□□ 0.43
Cdh11P55288 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh11P55288 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh11P55288 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.73■□□□□ 0.43
Cdh11P55288 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh11P55288 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh11P55288 Gm12821-201ENSMUST00000120022 600 ntBASIC17.73■□□□□ 0.43
Cdh11P55288 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh11P55288 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdh11P55288 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms