Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ephb3P54754 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ephb3P54754 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ephb3P54754 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ephb3P54754 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ephb3P54754 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ephb3P54754 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Ephb3P54754 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.68■□□□□ 0.9
Ephb3P54754 Gm13168-201ENSMUST00000121771 632 ntBASIC20.68■□□□□ 0.9
Ephb3P54754 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.68■□□□□ 0.9
Ephb3P54754 Gm22325-201ENSMUST00000158904 308 ntBASIC20.68■□□□□ 0.9
Ephb3P54754 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ephb3P54754 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ephb3P54754 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ephb3P54754 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ephb3P54754 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ephb3P54754 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ephb3P54754 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ephb3P54754 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.67■□□□□ 0.9
Ephb3P54754 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ephb3P54754 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ephb3P54754 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.67■□□□□ 0.9
Ephb3P54754 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ephb3P54754 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ephb3P54754 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ephb3P54754 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ephb3P54754 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ephb3P54754 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ephb3P54754 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ephb3P54754 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ephb3P54754 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ephb3P54754 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ephb3P54754 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ephb3P54754 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.66■□□□□ 0.9
Ephb3P54754 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ephb3P54754 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ephb3P54754 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ephb3P54754 Gm6365-201ENSMUST00000054711 744 ntBASIC20.66■□□□□ 0.9
Ephb3P54754 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ephb3P54754 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ephb3P54754 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ephb3P54754 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ephb3P54754 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ephb3P54754 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ephb3P54754 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ephb3P54754 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ephb3P54754 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ephb3P54754 Gm20049-201ENSMUST00000219950 730 ntBASIC20.65■□□□□ 0.9
Ephb3P54754 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ephb3P54754 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ephb3P54754 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ephb3P54754 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ephb3P54754 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Ephb3P54754 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ephb3P54754 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Ephb3P54754 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.64■□□□□ 0.89
Ephb3P54754 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ephb3P54754 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ephb3P54754 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.64■□□□□ 0.89
Ephb3P54754 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ephb3P54754 Gm13146-201ENSMUST00000118508 780 ntBASIC20.64■□□□□ 0.89
Ephb3P54754 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ephb3P54754 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.64■□□□□ 0.89
Ephb3P54754 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ephb3P54754 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ephb3P54754 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Ephb3P54754 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Ephb3P54754 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ephb3P54754 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ephb3P54754 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.63■□□□□ 0.89
Ephb3P54754 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.63■□□□□ 0.89
Ephb3P54754 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ephb3P54754 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ephb3P54754 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ephb3P54754 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ephb3P54754 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ephb3P54754 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ephb3P54754 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ephb3P54754 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ephb3P54754 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ephb3P54754 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.62■□□□□ 0.89
Ephb3P54754 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ephb3P54754 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.62■□□□□ 0.89
Ephb3P54754 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ephb3P54754 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ephb3P54754 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ephb3P54754 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ephb3P54754 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ephb3P54754 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ephb3P54754 Gm38205-201ENSMUST00000192243 258 ntBASIC20.61■□□□□ 0.89
Ephb3P54754 Gm6420-201ENSMUST00000193885 723 ntBASIC20.61■□□□□ 0.89
Ephb3P54754 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.61■□□□□ 0.89
Ephb3P54754 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ephb3P54754 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ephb3P54754 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ephb3P54754 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ephb3P54754 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ephb3P54754 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.6■□□□□ 0.89
Ephb3P54754 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.6■□□□□ 0.89
Ephb3P54754 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms