Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nub1P54729 Spcs1-204ENSMUST00000226782 949 ntBASIC21.11■□□□□ 0.97
Nub1P54729 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Nub1P54729 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nub1P54729 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nub1P54729 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nub1P54729 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nub1P54729 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.1■□□□□ 0.97
Nub1P54729 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nub1P54729 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nub1P54729 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nub1P54729 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Nub1P54729 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Nub1P54729 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nub1P54729 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.1■□□□□ 0.97
Nub1P54729 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Nub1P54729 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nub1P54729 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nub1P54729 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nub1P54729 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.1■□□□□ 0.97
Nub1P54729 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nub1P54729 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nub1P54729 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nub1P54729 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nub1P54729 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nub1P54729 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nub1P54729 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nub1P54729 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nub1P54729 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nub1P54729 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nub1P54729 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nub1P54729 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.08■□□□□ 0.97
Nub1P54729 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nub1P54729 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.08■□□□□ 0.97
Nub1P54729 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Nub1P54729 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nub1P54729 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nub1P54729 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nub1P54729 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Nub1P54729 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Nub1P54729 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.07■□□□□ 0.96
Nub1P54729 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nub1P54729 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nub1P54729 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Nub1P54729 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Nub1P54729 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Nub1P54729 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nub1P54729 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.07■□□□□ 0.96
Nub1P54729 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nub1P54729 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nub1P54729 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Nub1P54729 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nub1P54729 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nub1P54729 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nub1P54729 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.06■□□□□ 0.96
Nub1P54729 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.06■□□□□ 0.96
Nub1P54729 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nub1P54729 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.06■□□□□ 0.96
Nub1P54729 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nub1P54729 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.06■□□□□ 0.96
Nub1P54729 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nub1P54729 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Nub1P54729 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nub1P54729 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Nub1P54729 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nub1P54729 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nub1P54729 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nub1P54729 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nub1P54729 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nub1P54729 Gm6139-201ENSMUST00000079261 882 ntBASIC21.05■□□□□ 0.96
Nub1P54729 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nub1P54729 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nub1P54729 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nub1P54729 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Nub1P54729 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nub1P54729 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nub1P54729 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nub1P54729 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nub1P54729 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nub1P54729 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nub1P54729 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nub1P54729 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nub1P54729 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.04■□□□□ 0.96
Nub1P54729 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nub1P54729 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nub1P54729 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nub1P54729 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nub1P54729 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nub1P54729 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.03■□□□□ 0.96
Nub1P54729 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.03■□□□□ 0.96
Nub1P54729 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nub1P54729 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nub1P54729 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.03■□□□□ 0.96
Nub1P54729 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nub1P54729 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nub1P54729 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Nub1P54729 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nub1P54729 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nub1P54729 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nub1P54729 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms