Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.51■■□□□ 1.03
SqleP52019 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SqleP52019 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.51■■□□□ 1.03
SqleP52019 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.51■■□□□ 1.03
SqleP52019 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SqleP52019 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SqleP52019 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
SqleP52019 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SqleP52019 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SqleP52019 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SqleP52019 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SqleP52019 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.5■■□□□ 1.03
SqleP52019 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SqleP52019 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SqleP52019 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SqleP52019 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.5■■□□□ 1.03
SqleP52019 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.5■■□□□ 1.03
SqleP52019 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SqleP52019 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SqleP52019 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.49■■□□□ 1.03
SqleP52019 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SqleP52019 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.49■■□□□ 1.03
SqleP52019 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SqleP52019 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SqleP52019 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SqleP52019 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SqleP52019 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SqleP52019 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.48■■□□□ 1.03
SqleP52019 Gm26524-201ENSMUST00000192339 390 ntBASIC21.48■■□□□ 1.03
SqleP52019 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SqleP52019 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SqleP52019 Rab3c-203ENSMUST00000224180 967 ntBASIC21.48■■□□□ 1.03
SqleP52019 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SqleP52019 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SqleP52019 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SqleP52019 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SqleP52019 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SqleP52019 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SqleP52019 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SqleP52019 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SqleP52019 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SqleP52019 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.46■■□□□ 1.03
SqleP52019 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SqleP52019 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SqleP52019 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SqleP52019 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SqleP52019 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SqleP52019 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
SqleP52019 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SqleP52019 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SqleP52019 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
SqleP52019 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SqleP52019 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SqleP52019 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.45■■□□□ 1.02
SqleP52019 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.45■■□□□ 1.02
SqleP52019 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SqleP52019 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SqleP52019 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SqleP52019 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.45■■□□□ 1.02
SqleP52019 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SqleP52019 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SqleP52019 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SqleP52019 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SqleP52019 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SqleP52019 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SqleP52019 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SqleP52019 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SqleP52019 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SqleP52019 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.43■■□□□ 1.02
SqleP52019 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SqleP52019 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
SqleP52019 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SqleP52019 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SqleP52019 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SqleP52019 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SqleP52019 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SqleP52019 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SqleP52019 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
SqleP52019 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SqleP52019 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SqleP52019 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SqleP52019 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SqleP52019 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.41■■□□□ 1.02
SqleP52019 Gm5643-201ENSMUST00000117081 966 ntBASIC21.41■■□□□ 1.02
SqleP52019 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.41■■□□□ 1.02
SqleP52019 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.41■■□□□ 1.02
SqleP52019 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SqleP52019 Gm27275-201ENSMUST00000184318 272 ntBASIC21.41■■□□□ 1.02
SqleP52019 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SqleP52019 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SqleP52019 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SqleP52019 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SqleP52019 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.4■■□□□ 1.02
SqleP52019 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SqleP52019 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SqleP52019 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SqleP52019 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SqleP52019 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SqleP52019 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.39■■□□□ 1.01
SqleP52019 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms