Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
GdnfP48540 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GdnfP48540 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GdnfP48540 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GdnfP48540 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GdnfP48540 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.1■□□□□ 0.33
GdnfP48540 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GdnfP48540 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GdnfP48540 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GdnfP48540 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GdnfP48540 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GdnfP48540 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GdnfP48540 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GdnfP48540 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GdnfP48540 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GdnfP48540 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GdnfP48540 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.08■□□□□ 0.33
GdnfP48540 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GdnfP48540 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GdnfP48540 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GdnfP48540 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.08■□□□□ 0.32
GdnfP48540 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GdnfP48540 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GdnfP48540 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
GdnfP48540 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GdnfP48540 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GdnfP48540 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GdnfP48540 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GdnfP48540 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GdnfP48540 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GdnfP48540 Gm7417-201ENSMUST00000192950 473 ntBASIC17.07■□□□□ 0.32
GdnfP48540 Rps24-207ENSMUST00000224568 714 ntBASIC17.07■□□□□ 0.32
GdnfP48540 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GdnfP48540 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GdnfP48540 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GdnfP48540 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
GdnfP48540 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GdnfP48540 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GdnfP48540 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GdnfP48540 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GdnfP48540 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GdnfP48540 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.06■□□□□ 0.32
GdnfP48540 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GdnfP48540 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GdnfP48540 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.06■□□□□ 0.32
GdnfP48540 Gm45102-201ENSMUST00000207427 857 ntBASIC17.06■□□□□ 0.32
GdnfP48540 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GdnfP48540 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.06■□□□□ 0.32
GdnfP48540 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.05■□□□□ 0.32
GdnfP48540 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GdnfP48540 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.05■□□□□ 0.32
GdnfP48540 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.05■□□□□ 0.32
GdnfP48540 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GdnfP48540 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
GdnfP48540 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GdnfP48540 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GdnfP48540 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GdnfP48540 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GdnfP48540 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GdnfP48540 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GdnfP48540 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GdnfP48540 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GdnfP48540 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
GdnfP48540 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
GdnfP48540 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GdnfP48540 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.03■□□□□ 0.32
GdnfP48540 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.03■□□□□ 0.32
GdnfP48540 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GdnfP48540 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.03■□□□□ 0.32
GdnfP48540 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GdnfP48540 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
GdnfP48540 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GdnfP48540 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GdnfP48540 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GdnfP48540 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GdnfP48540 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.02■□□□□ 0.32
GdnfP48540 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms