Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfx2P48379 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfx2P48379 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfx2P48379 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfx2P48379 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfx2P48379 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rfx2P48379 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx2P48379 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx2P48379 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx2P48379 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx2P48379 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx2P48379 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx2P48379 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx2P48379 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx2P48379 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rfx2P48379 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx2P48379 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx2P48379 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx2P48379 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.56■□□□□ 0.88
Rfx2P48379 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rfx2P48379 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx2P48379 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Rfx2P48379 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx2P48379 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx2P48379 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx2P48379 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx2P48379 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx2P48379 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx2P48379 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx2P48379 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx2P48379 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx2P48379 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx2P48379 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx2P48379 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx2P48379 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rfx2P48379 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx2P48379 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx2P48379 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rfx2P48379 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.54■□□□□ 0.88
Rfx2P48379 Smad6-203ENSMUST00000179458 273 ntBASIC20.54■□□□□ 0.88
Rfx2P48379 Mir6236-201ENSMUST00000184437 123 ntBASIC20.54■□□□□ 0.88
Rfx2P48379 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx2P48379 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rfx2P48379 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.54■□□□□ 0.88
Rfx2P48379 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx2P48379 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.53■□□□□ 0.88
Rfx2P48379 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.53■□□□□ 0.88
Rfx2P48379 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx2P48379 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rfx2P48379 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx2P48379 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx2P48379 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx2P48379 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
Rfx2P48379 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.52■□□□□ 0.88
Rfx2P48379 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.52■□□□□ 0.88
Rfx2P48379 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rfx2P48379 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Rfx2P48379 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx2P48379 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx2P48379 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.51■□□□□ 0.87
Rfx2P48379 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rfx2P48379 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.51■□□□□ 0.87
Rfx2P48379 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx2P48379 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx2P48379 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Rfx2P48379 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rfx2P48379 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx2P48379 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx2P48379 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx2P48379 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx2P48379 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.51■□□□□ 0.87
Rfx2P48379 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx2P48379 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx2P48379 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx2P48379 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx2P48379 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx2P48379 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx2P48379 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rfx2P48379 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx2P48379 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.5■□□□□ 0.87
Rfx2P48379 Gm10493-201ENSMUST00000097270 612 ntBASIC20.5■□□□□ 0.87
Rfx2P48379 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx2P48379 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx2P48379 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.5■□□□□ 0.87
Rfx2P48379 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx2P48379 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.5■□□□□ 0.87
Rfx2P48379 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx2P48379 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms