Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h1aP43275 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h1aP43275 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Hist1h1aP43275 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hist1h1aP43275 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h1aP43275 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h1aP43275 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.13■□□□□ 0.17
Hist1h1aP43275 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h1aP43275 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h1aP43275 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h1aP43275 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h1aP43275 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h1aP43275 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h1aP43275 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Gm7143-201ENSMUST00000222811 859 ntBASIC16.12■□□□□ 0.17
Hist1h1aP43275 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h1aP43275 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h1aP43275 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Hist1h1aP43275 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h1aP43275 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h1aP43275 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h1aP43275 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h1aP43275 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h1aP43275 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Hist1h1aP43275 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h1aP43275 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h1aP43275 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.11■□□□□ 0.17
Hist1h1aP43275 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h1aP43275 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h1aP43275 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h1aP43275 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h1aP43275 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Hist1h1aP43275 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.1■□□□□ 0.17
Hist1h1aP43275 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hist1h1aP43275 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h1aP43275 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Hist1h1aP43275 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h1aP43275 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h1aP43275 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h1aP43275 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hist1h1aP43275 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hist1h1aP43275 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hist1h1aP43275 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hist1h1aP43275 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hist1h1aP43275 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hist1h1aP43275 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hist1h1aP43275 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.09■□□□□ 0.17
Hist1h1aP43275 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.09■□□□□ 0.17
Hist1h1aP43275 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.09■□□□□ 0.17
Hist1h1aP43275 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hist1h1aP43275 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hist1h1aP43275 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
Hist1h1aP43275 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hist1h1aP43275 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hist1h1aP43275 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hist1h1aP43275 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Hist1h1aP43275 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hist1h1aP43275 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Hist1h1aP43275 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hist1h1aP43275 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hist1h1aP43275 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Hist1h1aP43275 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hist1h1aP43275 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hist1h1aP43275 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hist1h1aP43275 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Hist1h1aP43275 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hist1h1aP43275 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hist1h1aP43275 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hist1h1aP43275 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h1aP43275 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h1aP43275 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h1aP43275 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h1aP43275 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h1aP43275 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms