Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.75■□□□□ 0.91
Gdf6P43028 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gdf6P43028 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gdf6P43028 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gdf6P43028 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gdf6P43028 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gdf6P43028 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gdf6P43028 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gdf6P43028 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gdf6P43028 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Gdf6P43028 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.74■□□□□ 0.91
Gdf6P43028 Gm29257-201ENSMUST00000186115 639 ntBASIC20.74■□□□□ 0.91
Gdf6P43028 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.74■□□□□ 0.91
Gdf6P43028 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.74■□□□□ 0.91
Gdf6P43028 Reep4-203ENSMUST00000226563 1444 ntBASIC20.74■□□□□ 0.91
Gdf6P43028 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gdf6P43028 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Gdf6P43028 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Gdf6P43028 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Gdf6P43028 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gdf6P43028 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.73■□□□□ 0.91
Gdf6P43028 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gdf6P43028 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gdf6P43028 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gdf6P43028 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gdf6P43028 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gdf6P43028 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gdf6P43028 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.73■□□□□ 0.91
Gdf6P43028 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gdf6P43028 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.73■□□□□ 0.91
Gdf6P43028 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gdf6P43028 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gdf6P43028 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gdf6P43028 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gdf6P43028 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gdf6P43028 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gdf6P43028 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gdf6P43028 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Gdf6P43028 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.72■□□□□ 0.91
Gdf6P43028 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Gdf6P43028 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Gdf6P43028 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gdf6P43028 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gdf6P43028 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gdf6P43028 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gdf6P43028 AA386476-201ENSMUST00000098781 1665 ntBASIC20.71■□□□□ 0.91
Gdf6P43028 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gdf6P43028 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gdf6P43028 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Gdf6P43028 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gdf6P43028 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gdf6P43028 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.7■□□□□ 0.9
Gdf6P43028 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gdf6P43028 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gdf6P43028 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gdf6P43028 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gdf6P43028 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Gdf6P43028 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gdf6P43028 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gdf6P43028 Gm13234-201ENSMUST00000120010 747 ntBASIC20.69■□□□□ 0.9
Gdf6P43028 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Gdf6P43028 Gm37179-201ENSMUST00000194862 823 ntBASIC20.69■□□□□ 0.9
Gdf6P43028 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.69■□□□□ 0.9
Gdf6P43028 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.69■□□□□ 0.9
Gdf6P43028 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Gdf6P43028 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.69■□□□□ 0.9
Gdf6P43028 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gdf6P43028 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gdf6P43028 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gdf6P43028 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gdf6P43028 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.68■□□□□ 0.9
Gdf6P43028 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.68■□□□□ 0.9
Gdf6P43028 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gdf6P43028 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gdf6P43028 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Gdf6P43028 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gdf6P43028 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.67■□□□□ 0.9
Gdf6P43028 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gdf6P43028 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.67■□□□□ 0.9
Gdf6P43028 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gdf6P43028 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.67■□□□□ 0.9
Gdf6P43028 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.67■□□□□ 0.9
Gdf6P43028 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gdf6P43028 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gdf6P43028 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.67■□□□□ 0.9
Gdf6P43028 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gdf6P43028 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gdf6P43028 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gdf6P43028 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Gdf6P43028 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Gdf6P43028 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gdf6P43028 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Gdf6P43028 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Gdf6P43028 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gdf6P43028 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gdf6P43028 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gdf6P43028 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.66■□□□□ 0.9
Gdf6P43028 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gdf6P43028 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gdf6P43028 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms