Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HmgclP38060 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HmgclP38060 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.39■□□□□ 0.69
HmgclP38060 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.39■□□□□ 0.69
HmgclP38060 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HmgclP38060 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HmgclP38060 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HmgclP38060 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HmgclP38060 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HmgclP38060 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HmgclP38060 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HmgclP38060 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HmgclP38060 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HmgclP38060 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HmgclP38060 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HmgclP38060 Mir7075-201ENSMUST00000184187 82 ntBASIC19.38■□□□□ 0.69
HmgclP38060 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HmgclP38060 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HmgclP38060 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HmgclP38060 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HmgclP38060 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HmgclP38060 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HmgclP38060 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HmgclP38060 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.37■□□□□ 0.69
HmgclP38060 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HmgclP38060 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HmgclP38060 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HmgclP38060 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
HmgclP38060 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HmgclP38060 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HmgclP38060 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HmgclP38060 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HmgclP38060 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HmgclP38060 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HmgclP38060 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HmgclP38060 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
HmgclP38060 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HmgclP38060 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HmgclP38060 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HmgclP38060 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HmgclP38060 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HmgclP38060 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
HmgclP38060 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HmgclP38060 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HmgclP38060 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HmgclP38060 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HmgclP38060 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HmgclP38060 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HmgclP38060 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HmgclP38060 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HmgclP38060 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HmgclP38060 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HmgclP38060 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HmgclP38060 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HmgclP38060 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.35■□□□□ 0.69
HmgclP38060 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HmgclP38060 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HmgclP38060 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HmgclP38060 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.35■□□□□ 0.69
HmgclP38060 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HmgclP38060 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.35■□□□□ 0.69
HmgclP38060 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HmgclP38060 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HmgclP38060 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HmgclP38060 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
HmgclP38060 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HmgclP38060 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HmgclP38060 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HmgclP38060 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HmgclP38060 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HmgclP38060 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HmgclP38060 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HmgclP38060 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
HmgclP38060 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.34■□□□□ 0.69
HmgclP38060 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HmgclP38060 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HmgclP38060 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HmgclP38060 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HmgclP38060 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HmgclP38060 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HmgclP38060 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HmgclP38060 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HmgclP38060 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HmgclP38060 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.33■□□□□ 0.68
HmgclP38060 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.33■□□□□ 0.68
HmgclP38060 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HmgclP38060 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HmgclP38060 Serp2-204ENSMUST00000228055 705 ntBASIC19.33■□□□□ 0.68
HmgclP38060 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HmgclP38060 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.33■□□□□ 0.68
HmgclP38060 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HmgclP38060 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HmgclP38060 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HmgclP38060 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HmgclP38060 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HmgclP38060 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HmgclP38060 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HmgclP38060 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HmgclP38060 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.32■□□□□ 0.68
HmgclP38060 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms