Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.47■■□□□ 1.03
Sox5P35710 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox5P35710 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox5P35710 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.46■■□□□ 1.03
Sox5P35710 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox5P35710 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.46■■□□□ 1.03
Sox5P35710 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.46■■□□□ 1.03
Sox5P35710 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.46■■□□□ 1.03
Sox5P35710 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sox5P35710 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Sox5P35710 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Sox5P35710 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Sox5P35710 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sox5P35710 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sox5P35710 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox5P35710 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox5P35710 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox5P35710 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox5P35710 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox5P35710 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox5P35710 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox5P35710 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sox5P35710 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox5P35710 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sox5P35710 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
Sox5P35710 Golph3-205ENSMUST00000228671 2842 ntBASIC21.44■■□□□ 1.02
Sox5P35710 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Sox5P35710 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.44■■□□□ 1.02
Sox5P35710 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox5P35710 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox5P35710 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sox5P35710 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox5P35710 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox5P35710 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox5P35710 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.43■■□□□ 1.02
Sox5P35710 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Sox5P35710 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox5P35710 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Sox5P35710 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox5P35710 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox5P35710 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Sox5P35710 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox5P35710 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Sox5P35710 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Sox5P35710 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.42■■□□□ 1.02
Sox5P35710 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sox5P35710 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sox5P35710 Etf1-202ENSMUST00000180351 108 ntBASIC21.42■■□□□ 1.02
Sox5P35710 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox5P35710 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox5P35710 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox5P35710 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox5P35710 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox5P35710 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox5P35710 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sox5P35710 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.41■■□□□ 1.02
Sox5P35710 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox5P35710 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox5P35710 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sox5P35710 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox5P35710 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Sox5P35710 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox5P35710 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox5P35710 Gm15820-201ENSMUST00000201566 728 ntBASIC21.4■■□□□ 1.02
Sox5P35710 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox5P35710 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox5P35710 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox5P35710 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sox5P35710 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sox5P35710 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sox5P35710 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sox5P35710 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sox5P35710 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.39■■□□□ 1.01
Sox5P35710 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.39■■□□□ 1.01
Sox5P35710 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.39■■□□□ 1.01
Sox5P35710 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Sox5P35710 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox5P35710 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox5P35710 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox5P35710 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox5P35710 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox5P35710 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.38■■□□□ 1.01
Sox5P35710 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox5P35710 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox5P35710 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox5P35710 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox5P35710 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox5P35710 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox5P35710 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox5P35710 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox5P35710 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Sox5P35710 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sox5P35710 Gm7417-201ENSMUST00000192950 473 ntBASIC21.37■■□□□ 1.01
Sox5P35710 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox5P35710 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Sox5P35710 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sox5P35710 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox5P35710 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
Sox5P35710 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sox5P35710 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms