Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc1P35601 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc1P35601 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rfc1P35601 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc1P35601 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.62■□□□□ 0.89
Rfc1P35601 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc1P35601 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc1P35601 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc1P35601 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc1P35601 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc1P35601 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc1P35601 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc1P35601 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.61■□□□□ 0.89
Rfc1P35601 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.61■□□□□ 0.89
Rfc1P35601 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc1P35601 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc1P35601 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc1P35601 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc1P35601 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.61■□□□□ 0.89
Rfc1P35601 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rfc1P35601 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfc1P35601 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rfc1P35601 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.6■□□□□ 0.89
Rfc1P35601 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.6■□□□□ 0.89
Rfc1P35601 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfc1P35601 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.6■□□□□ 0.89
Rfc1P35601 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.6■□□□□ 0.89
Rfc1P35601 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfc1P35601 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Rfc1P35601 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfc1P35601 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rfc1P35601 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.6■□□□□ 0.89
Rfc1P35601 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfc1P35601 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc1P35601 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc1P35601 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc1P35601 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rfc1P35601 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc1P35601 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc1P35601 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.59■□□□□ 0.89
Rfc1P35601 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc1P35601 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc1P35601 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.59■□□□□ 0.89
Rfc1P35601 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc1P35601 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc1P35601 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfc1P35601 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.58■□□□□ 0.89
Rfc1P35601 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rfc1P35601 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfc1P35601 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfc1P35601 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfc1P35601 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfc1P35601 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfc1P35601 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfc1P35601 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc1P35601 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc1P35601 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.57■□□□□ 0.88
Rfc1P35601 Gm45444-201ENSMUST00000211394 898 ntBASIC20.57■□□□□ 0.88
Rfc1P35601 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rfc1P35601 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc1P35601 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rfc1P35601 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Rfc1P35601 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc1P35601 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rfc1P35601 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.56■□□□□ 0.88
Rfc1P35601 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.56■□□□□ 0.88
Rfc1P35601 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rfc1P35601 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.56■□□□□ 0.88
Rfc1P35601 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rfc1P35601 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.56■□□□□ 0.88
Rfc1P35601 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc1P35601 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rfc1P35601 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Rfc1P35601 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc1P35601 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc1P35601 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc1P35601 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc1P35601 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.55■□□□□ 0.88
Rfc1P35601 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Rfc1P35601 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Rfc1P35601 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Rfc1P35601 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc1P35601 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc1P35601 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc1P35601 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc1P35601 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc1P35601 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc1P35601 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms