Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa1P35582 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Foxa1P35582 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa1P35582 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa1P35582 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa1P35582 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa1P35582 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa1P35582 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa1P35582 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa1P35582 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxa1P35582 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Foxa1P35582 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Foxa1P35582 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Foxa1P35582 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxa1P35582 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.18■□□□□ 0.5
Foxa1P35582 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Foxa1P35582 Gm8493-201ENSMUST00000196881 489 ntBASIC18.18■□□□□ 0.5
Foxa1P35582 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxa1P35582 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Foxa1P35582 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.18■□□□□ 0.5
Foxa1P35582 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxa1P35582 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxa1P35582 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Foxa1P35582 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Foxa1P35582 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxa1P35582 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Foxa1P35582 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.17■□□□□ 0.5
Foxa1P35582 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.17■□□□□ 0.5
Foxa1P35582 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Foxa1P35582 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.17■□□□□ 0.5
Foxa1P35582 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.17■□□□□ 0.5
Foxa1P35582 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxa1P35582 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxa1P35582 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxa1P35582 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.17■□□□□ 0.5
Foxa1P35582 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa1P35582 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa1P35582 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa1P35582 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa1P35582 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Foxa1P35582 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Foxa1P35582 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa1P35582 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa1P35582 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Foxa1P35582 Gm6139-201ENSMUST00000079261 882 ntBASIC18.16■□□□□ 0.5
Foxa1P35582 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa1P35582 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.16■□□□□ 0.5
Foxa1P35582 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa1P35582 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
Foxa1P35582 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa1P35582 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa1P35582 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa1P35582 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa1P35582 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa1P35582 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa1P35582 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa1P35582 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa1P35582 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa1P35582 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.15■□□□□ 0.5
Foxa1P35582 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.15■□□□□ 0.5
Foxa1P35582 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Foxa1P35582 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Foxa1P35582 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Foxa1P35582 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Foxa1P35582 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Foxa1P35582 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa1P35582 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.14■□□□□ 0.49
Foxa1P35582 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa1P35582 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa1P35582 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa1P35582 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa1P35582 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Foxa1P35582 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa1P35582 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa1P35582 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa1P35582 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa1P35582 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.13■□□□□ 0.49
Foxa1P35582 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.13■□□□□ 0.49
Foxa1P35582 Gm43173-201ENSMUST00000202246 593 ntBASIC18.13■□□□□ 0.49
Foxa1P35582 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.13■□□□□ 0.49
Foxa1P35582 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Foxa1P35582 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa1P35582 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa1P35582 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa1P35582 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa1P35582 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Foxa1P35582 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa1P35582 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa1P35582 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa1P35582 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.12■□□□□ 0.49
Foxa1P35582 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa1P35582 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa1P35582 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa1P35582 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa1P35582 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.11■□□□□ 0.49
Foxa1P35582 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxa1P35582 AA386476-201ENSMUST00000098781 1665 ntBASIC18.11■□□□□ 0.49
Foxa1P35582 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Foxa1P35582 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxa1P35582 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms