Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Slc6a11P31650 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.6■□□□□ 0.57
Slc6a11P31650 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a11P31650 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a11P31650 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a11P31650 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a11P31650 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Slc6a11P31650 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a11P31650 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a11P31650 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a11P31650 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a11P31650 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Slc6a11P31650 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a11P31650 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a11P31650 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a11P31650 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a11P31650 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.58■□□□□ 0.56
Slc6a11P31650 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.58■□□□□ 0.56
Slc6a11P31650 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a11P31650 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a11P31650 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a11P31650 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a11P31650 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a11P31650 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a11P31650 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Slc6a11P31650 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a11P31650 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a11P31650 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a11P31650 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a11P31650 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a11P31650 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.56■□□□□ 0.56
Slc6a11P31650 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.56■□□□□ 0.56
Slc6a11P31650 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.56■□□□□ 0.56
Slc6a11P31650 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a11P31650 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.55■□□□□ 0.56
Slc6a11P31650 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a11P31650 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Slc6a11P31650 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.55■□□□□ 0.56
Slc6a11P31650 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Slc6a11P31650 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.55■□□□□ 0.56
Slc6a11P31650 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.55■□□□□ 0.56
Slc6a11P31650 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a11P31650 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.55■□□□□ 0.56
Slc6a11P31650 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Slc6a11P31650 Gm7143-201ENSMUST00000222811 859 ntBASIC18.55■□□□□ 0.56
Slc6a11P31650 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
Slc6a11P31650 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a11P31650 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a11P31650 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a11P31650 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a11P31650 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a11P31650 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a11P31650 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.54■□□□□ 0.56
Slc6a11P31650 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.54■□□□□ 0.56
Slc6a11P31650 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.54■□□□□ 0.56
Slc6a11P31650 Gm8495-201ENSMUST00000188740 694 ntBASIC18.54■□□□□ 0.56
Slc6a11P31650 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a11P31650 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Slc6a11P31650 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a11P31650 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a11P31650 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.53■□□□□ 0.56
Slc6a11P31650 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Slc6a11P31650 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.53■□□□□ 0.56
Slc6a11P31650 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a11P31650 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Slc6a11P31650 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.53■□□□□ 0.56
Slc6a11P31650 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a11P31650 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Slc6a11P31650 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Slc6a11P31650 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a11P31650 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a11P31650 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Slc6a11P31650 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a11P31650 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a11P31650 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a11P31650 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a11P31650 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a11P31650 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a11P31650 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a11P31650 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a11P31650 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc6a11P31650 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a11P31650 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a11P31650 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc6a11P31650 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Slc6a11P31650 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc6a11P31650 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc6a11P31650 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms