Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
BgnP28653 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BgnP28653 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BgnP28653 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BgnP28653 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BgnP28653 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BgnP28653 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BgnP28653 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BgnP28653 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BgnP28653 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BgnP28653 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
BgnP28653 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BgnP28653 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BgnP28653 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BgnP28653 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.16■□□□□ 0.5
BgnP28653 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BgnP28653 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
BgnP28653 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BgnP28653 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
BgnP28653 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BgnP28653 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.15■□□□□ 0.5
BgnP28653 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BgnP28653 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
BgnP28653 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BgnP28653 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.15■□□□□ 0.5
BgnP28653 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BgnP28653 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BgnP28653 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BgnP28653 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
BgnP28653 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
BgnP28653 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
BgnP28653 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
BgnP28653 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BgnP28653 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BgnP28653 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BgnP28653 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BgnP28653 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BgnP28653 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.14■□□□□ 0.49
BgnP28653 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
BgnP28653 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
BgnP28653 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
BgnP28653 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BgnP28653 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BgnP28653 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BgnP28653 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.13■□□□□ 0.49
BgnP28653 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BgnP28653 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BgnP28653 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BgnP28653 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BgnP28653 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BgnP28653 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BgnP28653 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BgnP28653 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
BgnP28653 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BgnP28653 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BgnP28653 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BgnP28653 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.12■□□□□ 0.49
BgnP28653 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BgnP28653 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BgnP28653 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
BgnP28653 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
BgnP28653 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BgnP28653 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.12■□□□□ 0.49
BgnP28653 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.12■□□□□ 0.49
BgnP28653 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
BgnP28653 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BgnP28653 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BgnP28653 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.11■□□□□ 0.49
BgnP28653 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BgnP28653 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BgnP28653 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BgnP28653 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.11■□□□□ 0.49
BgnP28653 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BgnP28653 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BgnP28653 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BgnP28653 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BgnP28653 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
BgnP28653 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BgnP28653 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BgnP28653 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BgnP28653 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BgnP28653 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BgnP28653 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BgnP28653 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
BgnP28653 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
BgnP28653 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BgnP28653 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BgnP28653 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
BgnP28653 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BgnP28653 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.09■□□□□ 0.49
BgnP28653 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
BgnP28653 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
BgnP28653 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
BgnP28653 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BgnP28653 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
BgnP28653 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BgnP28653 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BgnP28653 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BgnP28653 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BgnP28653 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms