Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.62■□□□□ 0.57
Rpl3P27659 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl3P27659 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rpl3P27659 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl3P27659 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl3P27659 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.62■□□□□ 0.57
Rpl3P27659 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl3P27659 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl3P27659 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rpl3P27659 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl3P27659 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl3P27659 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl3P27659 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.61■□□□□ 0.57
Rpl3P27659 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl3P27659 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl3P27659 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.61■□□□□ 0.57
Rpl3P27659 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl3P27659 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rpl3P27659 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl3P27659 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpl3P27659 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpl3P27659 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpl3P27659 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpl3P27659 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpl3P27659 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.6■□□□□ 0.57
Rpl3P27659 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpl3P27659 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.6■□□□□ 0.57
Rpl3P27659 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
Rpl3P27659 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpl3P27659 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.59■□□□□ 0.57
Rpl3P27659 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpl3P27659 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpl3P27659 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.59■□□□□ 0.57
Rpl3P27659 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpl3P27659 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpl3P27659 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpl3P27659 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpl3P27659 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpl3P27659 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpl3P27659 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpl3P27659 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rpl3P27659 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpl3P27659 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpl3P27659 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.58■□□□□ 0.56
Rpl3P27659 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpl3P27659 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpl3P27659 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpl3P27659 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rpl3P27659 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpl3P27659 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rpl3P27659 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl3P27659 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.57■□□□□ 0.56
Rpl3P27659 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl3P27659 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl3P27659 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl3P27659 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl3P27659 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rpl3P27659 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl3P27659 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.56■□□□□ 0.56
Rpl3P27659 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rpl3P27659 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl3P27659 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl3P27659 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl3P27659 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl3P27659 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.56■□□□□ 0.56
Rpl3P27659 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl3P27659 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rpl3P27659 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl3P27659 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.55■□□□□ 0.56
Rpl3P27659 Gm12922-201ENSMUST00000120626 809 ntBASIC18.55■□□□□ 0.56
Rpl3P27659 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl3P27659 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl3P27659 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl3P27659 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl3P27659 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl3P27659 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rpl3P27659 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpl3P27659 AA386476-201ENSMUST00000098781 1665 ntBASIC18.54■□□□□ 0.56
Rpl3P27659 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpl3P27659 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rpl3P27659 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpl3P27659 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpl3P27659 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.54■□□□□ 0.56
Rpl3P27659 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpl3P27659 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpl3P27659 Golph3-202ENSMUST00000226517 2359 ntBASIC18.54■□□□□ 0.56
Rpl3P27659 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms