Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Col8a2P25318 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.45■□□□□ 0.22
Col8a2P25318 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Col8a2P25318 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.45■□□□□ 0.22
Col8a2P25318 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.45■□□□□ 0.22
Col8a2P25318 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
Col8a2P25318 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.45■□□□□ 0.22
Col8a2P25318 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col8a2P25318 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col8a2P25318 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col8a2P25318 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col8a2P25318 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col8a2P25318 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col8a2P25318 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col8a2P25318 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Col8a2P25318 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col8a2P25318 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col8a2P25318 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Col8a2P25318 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Col8a2P25318 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.44■□□□□ 0.22
Col8a2P25318 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col8a2P25318 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Col8a2P25318 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col8a2P25318 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.43■□□□□ 0.22
Col8a2P25318 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.43■□□□□ 0.22
Col8a2P25318 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col8a2P25318 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col8a2P25318 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col8a2P25318 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.43■□□□□ 0.22
Col8a2P25318 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.43■□□□□ 0.22
Col8a2P25318 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col8a2P25318 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col8a2P25318 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col8a2P25318 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col8a2P25318 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col8a2P25318 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col8a2P25318 Gm26571-201ENSMUST00000181399 666 ntBASIC16.42■□□□□ 0.22
Col8a2P25318 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Col8a2P25318 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.42■□□□□ 0.22
Col8a2P25318 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col8a2P25318 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col8a2P25318 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col8a2P25318 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col8a2P25318 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col8a2P25318 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col8a2P25318 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col8a2P25318 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Col8a2P25318 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.41■□□□□ 0.22
Col8a2P25318 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col8a2P25318 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col8a2P25318 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col8a2P25318 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col8a2P25318 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col8a2P25318 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col8a2P25318 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.41■□□□□ 0.22
Col8a2P25318 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col8a2P25318 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col8a2P25318 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.4■□□□□ 0.22
Col8a2P25318 Gm11421-201ENSMUST00000122124 294 ntBASIC16.4■□□□□ 0.22
Col8a2P25318 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Col8a2P25318 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 Gm5874-201ENSMUST00000096101 508 ntBASIC16.4■□□□□ 0.22
Col8a2P25318 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Col8a2P25318 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col8a2P25318 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Col8a2P25318 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col8a2P25318 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.39■□□□□ 0.21
Col8a2P25318 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.39■□□□□ 0.21
Col8a2P25318 Gm8495-201ENSMUST00000188740 694 ntBASIC16.39■□□□□ 0.21
Col8a2P25318 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col8a2P25318 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
Col8a2P25318 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col8a2P25318 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col8a2P25318 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Col8a2P25318 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col8a2P25318 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col8a2P25318 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.38■□□□□ 0.21
Col8a2P25318 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms