Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pde6bP23440 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pde6bP23440 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pde6bP23440 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.35■■□□□ 1.01
Pde6bP23440 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.35■■□□□ 1.01
Pde6bP23440 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.35■■□□□ 1.01
Pde6bP23440 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.35■■□□□ 1.01
Pde6bP23440 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pde6bP23440 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pde6bP23440 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pde6bP23440 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pde6bP23440 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pde6bP23440 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Pde6bP23440 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pde6bP23440 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pde6bP23440 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pde6bP23440 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pde6bP23440 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pde6bP23440 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pde6bP23440 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pde6bP23440 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pde6bP23440 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pde6bP23440 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pde6bP23440 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pde6bP23440 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pde6bP23440 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pde6bP23440 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pde6bP23440 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pde6bP23440 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pde6bP23440 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pde6bP23440 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pde6bP23440 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pde6bP23440 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pde6bP23440 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pde6bP23440 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.31■■□□□ 1
Pde6bP23440 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pde6bP23440 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pde6bP23440 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Pde6bP23440 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pde6bP23440 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.31■■□□□ 1
Pde6bP23440 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.31■■□□□ 1
Pde6bP23440 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pde6bP23440 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pde6bP23440 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pde6bP23440 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pde6bP23440 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pde6bP23440 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pde6bP23440 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pde6bP23440 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.3■■□□□ 1
Pde6bP23440 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Pde6bP23440 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pde6bP23440 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.29■■□□□ 1
Pde6bP23440 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pde6bP23440 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pde6bP23440 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pde6bP23440 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.29■■□□□ 1
Pde6bP23440 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pde6bP23440 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pde6bP23440 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pde6bP23440 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pde6bP23440 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.28■■□□□ 1
Pde6bP23440 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.28■■□□□ 1
Pde6bP23440 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.28■■□□□ 1
Pde6bP23440 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pde6bP23440 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pde6bP23440 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pde6bP23440 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pde6bP23440 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pde6bP23440 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pde6bP23440 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pde6bP23440 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pde6bP23440 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pde6bP23440 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pde6bP23440 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pde6bP23440 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.26■□□□□ 0.99
Pde6bP23440 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pde6bP23440 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.26■□□□□ 0.99
Pde6bP23440 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.26■□□□□ 0.99
Pde6bP23440 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pde6bP23440 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pde6bP23440 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pde6bP23440 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pde6bP23440 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pde6bP23440 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pde6bP23440 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pde6bP23440 Gm27801-201ENSMUST00000184174 223 ntBASIC21.25■□□□□ 0.99
Pde6bP23440 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pde6bP23440 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.25■□□□□ 0.99
Pde6bP23440 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pde6bP23440 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pde6bP23440 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pde6bP23440 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
Pde6bP23440 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pde6bP23440 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.24■□□□□ 0.99
Pde6bP23440 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6bP23440 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6bP23440 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Pde6bP23440 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.24■□□□□ 0.99
Pde6bP23440 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6bP23440 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms