Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Cbx3P23198 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cbx3P23198 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cbx3P23198 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cbx3P23198 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cbx3P23198 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cbx3P23198 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cbx3P23198 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cbx3P23198 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cbx3P23198 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cbx3P23198 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cbx3P23198 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cbx3P23198 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cbx3P23198 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cbx3P23198 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.77■□□□□ 0.44
Cbx3P23198 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.77■□□□□ 0.44
Cbx3P23198 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cbx3P23198 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cbx3P23198 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cbx3P23198 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cbx3P23198 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Cbx3P23198 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cbx3P23198 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Cbx3P23198 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cbx3P23198 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cbx3P23198 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cbx3P23198 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cbx3P23198 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.76■□□□□ 0.43
Cbx3P23198 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cbx3P23198 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cbx3P23198 Gm16437-201ENSMUST00000025669 507 ntBASIC17.76■□□□□ 0.43
Cbx3P23198 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cbx3P23198 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cbx3P23198 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cbx3P23198 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.75■□□□□ 0.43
Cbx3P23198 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cbx3P23198 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cbx3P23198 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cbx3P23198 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cbx3P23198 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cbx3P23198 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cbx3P23198 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cbx3P23198 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cbx3P23198 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cbx3P23198 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.75■□□□□ 0.43
Cbx3P23198 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cbx3P23198 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cbx3P23198 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cbx3P23198 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.74■□□□□ 0.43
Cbx3P23198 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.74■□□□□ 0.43
Cbx3P23198 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cbx3P23198 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cbx3P23198 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.74■□□□□ 0.43
Cbx3P23198 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cbx3P23198 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cbx3P23198 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cbx3P23198 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cbx3P23198 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.73■□□□□ 0.43
Cbx3P23198 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cbx3P23198 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cbx3P23198 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cbx3P23198 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cbx3P23198 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.72■□□□□ 0.43
Cbx3P23198 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.72■□□□□ 0.43
Cbx3P23198 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cbx3P23198 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cbx3P23198 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cbx3P23198 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cbx3P23198 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.71■□□□□ 0.43
Cbx3P23198 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cbx3P23198 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cbx3P23198 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cbx3P23198 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cbx3P23198 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.71■□□□□ 0.43
Cbx3P23198 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cbx3P23198 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms